| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7184 |
|---|
| Symbol | |
|---|
| ID | 6277447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3574491 |
|---|
| End bp | 3574976 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642618205 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_001890841 |
|---|
| Protein GI | 187921809 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA TCGAGGCAAA GCTGGCGCAA ATGGGATTGA CCTTGCCACA GCCGTTGCAG
ATGCCGGCAA ACGTGCGCAT GTCGTTGCCC TTCGCCTGGG TGCGCGTGAG CGGCACGCGA
GCATTCGTCT CGGGCCATGT GCCGCTCAAT CCGGACGGAA CGATTGCACA ACCCGTCGGC
AAAGTCGGCG CCGACGTTTC GCCAGACGAA GGCTACGCAG CAGCACGCCT TGTAGCGCTT
GCACAATTGG CTAGTCTTCA GAACGCGCTC GGCGATCTCG ATCGCATCAC GGCATGGGTG
CGTGTCTTTG CAATGATCAA CGCGGCGCCA ACTTTCGATC AGATGCCGCG AATCGCCAAC
GGCTTCTCGG ATTTGATTCT CGAGCTGTTC GGGCCGGACA TCGGAACGCA TGCCCGGTCG
GCAGTCGGCG TGGCGCTTCC CCTCAACGTG CCTGTGGAAT GCGAGGCTGA GGTCGAGTTC
GACTGA
|
|---|
| Protein sequence | MARIEAKLAQ MGLTLPQPLQ MPANVRMSLP FAWVRVSGTR AFVSGHVPLN PDGTIAQPVG
KVGADVSPDE GYAAARLVAL AQLASLQNAL GDLDRITAWV RVFAMINAAP TFDQMPRIAN
GFSDLILELF GPDIGTHARS AVGVALPLNV PVECEAEVEF D
|
|---|
| |