| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7162 |
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| Symbol | |
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| ID | 6278290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3555293 |
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| End bp | 3555688 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642618183 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_001890819 |
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| Protein GI | 187921787 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0743912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG CTCTTCTCCC CGCCGGCTGG GTCAAGCCGC GTGGTTACGC CAACGGCGTC
GCGGCAACCG GCACGCAGGT GTTCATTGCA GGTCAGATCG GCTGGGACGA ACAGGCACGT
TTCCAGACCG CCGACTTCGC TGCGCAAGCC ATCCAGGCGC TCAAGAACGT GCTTGCCGTT
TTGCATGAAG CGGGCGGCAA GCCTGAGCAT CTGGTGCGAT TGACGTGGTA CGTCACCGAC
AAACGCGAGT ATCTCGCGTC GCTGAAAGAC ATTGGCCGCG CGTTTCGCGA ATTGATCGGC
GACTACGACA TTGCAATGAG CGCGGTGCAG GTAGTCGCGC TGATCGAAGA CGAAGCGAAA
GTTGAAATTG AAGGGACCGC TGTGATTCCG CAGTAG
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| Protein sequence | MKKALLPAGW VKPRGYANGV AATGTQVFIA GQIGWDEQAR FQTADFAAQA IQALKNVLAV
LHEAGGKPEH LVRLTWYVTD KREYLASLKD IGRAFRELIG DYDIAMSAVQ VVALIEDEAK
VEIEGTAVIP Q
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