Gene Bphyt_7010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7010 
Symbol 
ID6280286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3390252 
End bp3391310 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content58% 
IMG OID642618033 
ProductparB-like partition protein 
Protein accessionYP_001890669 
Protein GI187921637 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.471525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00731349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCCT CCCAATTCGC CAAAGGCTTT CAAGCACGTC CTGACTCAAC CAGCAGCGAA 
AAGCGAACCG CGCTCGATCG ATTGAACGCT ATCGACGGCC TGGTCAAGAA TGATCCGAAG
AGTAGCGAGA CGGCGAGACG CACTATCGCG CCGGTCATGC CATCGCAGAA CGTTGCCGAA
GTCGACGCCG CTGACGTAGC CAATGAATCG GCGGCCTATC GCACGTGGCG GAACGAGCAC
GGCTATCGGC CAGGCCAGGT CATCGAGCTG GCGCTCAAGA CGATCAAGCC AAGCCCGTTC
AATCCGCGAC ATTTCTATCT GAAGTCGTCG ATTGCCGAGC TCGCTGTCAA TCTGGCCAAG
CAGGGGCAGC AGCAAGCGAT TCACGTTATC CCGGATTACG ACAATCCCGG CACCTACTAC
GTCAGCGATG GCGGGCGGCG GGTGCGGGCG CTGAAAGAGG CAAACAGGGA AACGGTGAAG
GCGATCGTCA TTGATCTGCC GATCGGTATC CAGAGCTACA AGCTCGGCTA CGACCTCAAC
GTCCAGCGCG ATTCGCAGAC GGTGTTCGAC AACGCGGTCG TATGGAAACG CTTTCTCGAC
GACCGGCATT TCCAGAGTCA GAAGGAACTT GCCGAACACC TCGGGCTAGA CGAGTCGACC
GTTGCGGTCG CCTTGTCGAT CGCCAAATTG CCTGAGGTCG TTATGCACGA GATGGTCGCG
CGACCGGACC GCTTCGGCTC GAACATGGCG TATCAGGTGG GTCGTTATCA CACTGCCCGC
GGCGCCGACG CAACGCTACG CCTGATCAAC AAGATCCTCT CGGACGATCT GAGTACGCGG
CAAGTCGCGG ACATCGTCAA AGGAAGAGCG TCCGCCCAGG AAAGCACTAA ACCCGCGGGC
CGGCAACGCT ACGCTCAGCG TCTGGAAATC AAACTCGACG GCGTGTCAGT CGGCGATCTC
AAATCGTATG GGGATGATCG AATTGAACTG CGCTTGAAGG GGCTCACGCG TGAAAAGCGC
GACGATATCC TTCGCCAGAT TGAAAAGATG TTGAAGTAG
 
Protein sequence
MKPSQFAKGF QARPDSTSSE KRTALDRLNA IDGLVKNDPK SSETARRTIA PVMPSQNVAE 
VDAADVANES AAYRTWRNEH GYRPGQVIEL ALKTIKPSPF NPRHFYLKSS IAELAVNLAK
QGQQQAIHVI PDYDNPGTYY VSDGGRRVRA LKEANRETVK AIVIDLPIGI QSYKLGYDLN
VQRDSQTVFD NAVVWKRFLD DRHFQSQKEL AEHLGLDEST VAVALSIAKL PEVVMHEMVA
RPDRFGSNMA YQVGRYHTAR GADATLRLIN KILSDDLSTR QVADIVKGRA SAQESTKPAG
RQRYAQRLEI KLDGVSVGDL KSYGDDRIEL RLKGLTREKR DDILRQIEKM LK