| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7007 |
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| Symbol | |
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| ID | 6277800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3384399 |
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| End bp | 3385481 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642618030 |
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| Product | integrase family protein |
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| Protein accession | YP_001890666 |
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| Protein GI | 187921634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.436087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTC CCCATCTGAC CGACCCGGTC CCTCGTCCTG CGCCGTCCAC GGATCTCTTC
GATCAGCAAC GTGAAGACTG GCGTCGCGAC CCGCAAATTG CTTTCGACGC CTGGCTTGCC
AAACAGAATT TCCGCCGTTC CTCCGCCGAA GTCTACCAGG CGCAATGGGG GCTTTTTCTC
GAATGGCTGA GCGTGCGCCA GAAAAGTCTC GCCACGGTCG ATGCTCACGC GATTGCCGAG
TTCGTCGCTG GTCTCGACGT GAAAAAGACC CAAAGGGTGC GGTATTTAAG GCTAATCGAA
CGGGTGCTCG ATCATGTGCG CGAAATCGAA TCCGCTTCGA CCAATCCGGC GCGCTTCATT
GCTCAGGATG GCGAAGCAGC GTGGCGGAAC GCACGCGATA ACGAGCCGAC CGGCTTTCTC
AACCACGCTG AACGAACGGC GCTGATCGCG CATCTGTTTT CGCCGCTGCC GGATTTGTCC
GCGGCGCAAC GTTGGCGGGA GCGGCGCGAC CGCGCTTTGA TCGCTGTGTT TCTAGGTGGC
GGATTGAAGA CGGGCGAAGC TGCAGCGCTT ACGGTTAGTT GCGTGCATGC CGGAATGCCG
TGGGTGACGA TCGAGTCAGC TAACCCGATG CTCACACGGC GCACCCGGCT CGCGCCCTTC
GCCGCAGCCA TTCTCGACGC GTGGCTTGCG GAACGGCGGT TGTCGGAACT GGCGGGCAAC
CTGGTATTTC CCGCATCGCC TTCCGGAAGG CCCATGCATA AAGCGACCAT GCTGCGCGCG
GTCGACGCCT TGATCGATGG AGCCGGAATC GCAGAATCGC GGGCATCGCG TGCCAGTCCG
CAAACATTGC GGAATACGTT CGCGGCGGAT CTGTTCGAAA GTGGAGTCGA GGCGGAACTG
GTCGGGCAAT GGCTGGGATT TGTGCAGGCC GTGTCGGCGA ACCGTCTGTA TCGAGCGTGG
CAAAACTGGA TGGATCATCA GGATTCTCCC GCCACCGACG TTCCGGATCC GGCGGTTCCG
CCCTTAGCCA CACCTAGACG CGACGGGCGT TTGACGAGGA AAAGGGGAGC CGTCGACTCC
TGA
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| Protein sequence | MSPPHLTDPV PRPAPSTDLF DQQREDWRRD PQIAFDAWLA KQNFRRSSAE VYQAQWGLFL
EWLSVRQKSL ATVDAHAIAE FVAGLDVKKT QRVRYLRLIE RVLDHVREIE SASTNPARFI
AQDGEAAWRN ARDNEPTGFL NHAERTALIA HLFSPLPDLS AAQRWRERRD RALIAVFLGG
GLKTGEAAAL TVSCVHAGMP WVTIESANPM LTRRTRLAPF AAAILDAWLA ERRLSELAGN
LVFPASPSGR PMHKATMLRA VDALIDGAGI AESRASRASP QTLRNTFAAD LFESGVEAEL
VGQWLGFVQA VSANRLYRAW QNWMDHQDSP ATDVPDPAVP PLATPRRDGR LTRKRGAVDS
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