Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6938 |
Symbol | |
ID | 6277790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3308316 |
End bp | 3309794 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617965 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_001890601 |
Protein GI | 187921569 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.776429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACG ACTGGGCAGG CCTTCCTGCC ACTTACGGCG ACGTACTGCG CCGGGCGATG GACTCGCTTT TCCGCACGTT CGAAAACTTC AGCGAAGGCA CCTTTATCGT CGATGCCGAC GCGCGCGTGG TCTGGATCAA CAAGCGCTAT GCGGCGCGCT TCGGTTTTGC GGACCCCGAG CAGGCCATTG GCCGCGATTG CGAAGCGGTG ATTCCGAACA GCCTGATGCG CGAGGTCGTG AACACCGGCA AACCGATTCT GCTCGATATT CTCGAAACGG ATCGCGAACC GCTCGTCGTC ACGCGTTTGC CGCTGAAAGA CGATGCGGGC GCCACGGTCG GCGCAGTTGG TTTCGCGCTG TTCGACGAAC TGAAGGCGCT GACGCCGCTC TTTTCCCACT ACTCGCGCGT GCAGGAAGAG TTGATCGCCA CGCGCCGGTC GCTCGCCCAG GCGCGGCGCG CCAAATATAC GTTCGGCAGT TTCGTCGGCA CGAGCGCGGC CAGCCTCGAA GTAAAGCGTC AGGCGCGCCG CGCCGCGCAG CTCGAATCGC CGGTGCTGCT GCTCGGCGAA ACCGGCACCG GCAAGGAACT GCTCGCGCAT GCCATTCACG GCGGCTCGGC GCGCGCGAAT CAGCCGCTCG TGACGGTCAA CGTCGCGGCG ATTCCCGACA CCCTGCTCGA AGTCGAATTC TTCGGCGCCG CGCCCGGCGC CTATACCGGC GCGGACCGCA AAGGGCGCGT CGGCAAGTTC GAACTGGCGA ACGGCGGCAC GCTGTTTCTC GACGAAATCG GCGACATGCC GCTGCCCTTG CAGGGCAAGC TGCTGCGCGT GTTGCAGGAC AAGGAGTTCG AACCGCTCGG CTCGAACCGG ATCGTGCGCG CCGACGCCCG GATCATCGCG GCGACGTCGG CCGATTTGCC CGCGCTGGTC GCGGCCGGGC GCTTTCGCGC GGACCTGTTC TATCGGCTGA ACGTGCTGAC GATCCATGCG CCGCCATTGC GCGAGCGCAC CTCCGATATC GAGGCGCTCG CTTACGCCAT GCTCGAGGAT CTGTCGACGC AAGCGCGCGG CGCCAGTCAT TTCGAATTGC AGGACGACGC GCTGCGGCTG CTGTGTTCAT ACGGCTGGCC GGGCAATGTG CGCGAATTGC GCAACACGCT GGAGCGTGCC GTGATGCTGT CCGACAGCGA GCGGATCGAT GCGCGGGCGC TGGCGCCGTT TGTCGGCTCG GCGCCCGGCG GCGCGCATCG TCCGAATGCG CCGTTACCTG AGGCGCTTTC GACGACGCAA CCGGCAAACG CCCAGCCTAC TCCGCCTGAA TCGGCCACGT GGAGTGAGGC GATGGCGGCC TTCGAAAAGC GATTCCTGAG CGATGCTTTG CGCGCCAATG GCGGTCGGGT GATCGATACG GCAAACCAGA TCGGAATGGG CCGCGCGACG CTCTATAAGA AGATCGCGGC ACACGGCATC GACGTGTGA
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Protein sequence | MMNDWAGLPA TYGDVLRRAM DSLFRTFENF SEGTFIVDAD ARVVWINKRY AARFGFADPE QAIGRDCEAV IPNSLMREVV NTGKPILLDI LETDREPLVV TRLPLKDDAG ATVGAVGFAL FDELKALTPL FSHYSRVQEE LIATRRSLAQ ARRAKYTFGS FVGTSAASLE VKRQARRAAQ LESPVLLLGE TGTGKELLAH AIHGGSARAN QPLVTVNVAA IPDTLLEVEF FGAAPGAYTG ADRKGRVGKF ELANGGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPLGSNR IVRADARIIA ATSADLPALV AAGRFRADLF YRLNVLTIHA PPLRERTSDI EALAYAMLED LSTQARGASH FELQDDALRL LCSYGWPGNV RELRNTLERA VMLSDSERID ARALAPFVGS APGGAHRPNA PLPEALSTTQ PANAQPTPPE SATWSEAMAA FEKRFLSDAL RANGGRVIDT ANQIGMGRAT LYKKIAAHGI DV
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