| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6926 |
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| Symbol | |
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| ID | 6278697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3294573 |
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| End bp | 3295595 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642617953 |
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| Product | Fimbrial protein |
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| Protein accession | YP_001890589 |
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| Protein GI | 187921557 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.289443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.816903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACG TCTGTTTTGG CCGCCGCAAT AGGATGCGGC TTGCCGTGGC AATTGCCGCA
AGTTCGCTTG CTCTGGGCAT TGCGTTTCCC GCCCACGCGG CATGCAGAAT CGTTGACGGC
TTCGCGCCTG CGCAAGGTGT TGTGAACTGG GGCATCGTGG CGGCGCCGAC CAATGTGGCG
ATTGGATCGG TCATCGCCAA AACAGACATG AAATACGATT CGCTTTTCAC ACATCAATCG
TGGCACTGCG ACGGTAGCTC TTTTAATGAA TATTTTACGA TGGACCCACG GCACGTGTTG
TCCGACATTT TTGAAACGAA CATTCCAGGA CTTGGCGTTC GCGCTTCGGT GTCGCTCGTC
GGCGAGGATT TATTCTCTTC CATACCCCTA AACTTTTCTT TGGACCACTC CGGGCAGAAC
ACCGGCAAGA CTGACGACGT GTACGTTTTT ATCGAACTTG TCGTAACTGG TCCAATCGAC
ACGAGCGCTA CCGACATGCT GTCCTACAAC GCGGCAGGAT GGCACCATGT CCGAGATTCG
TTTGACGGAA ATATACTGAC GCTGGCGAAT CTCATGATTT ACGCTCAAAT TAACTCGCCC
ACCTGCAGCG TCACGCAGTC TTCAGTTGCA GTGACCTTGC CCCCGGCCCC TGTGGCGAAC
CTGAGTAACC CAAACTCCAC CACGGGGGCA ACGCCCTTCA ATCTTCAACT GAACTGCTCG
TTGTCGTCTA ACGTCAATGT AACGCTCACC GATGCGACGG ATGTTTCCAA CCGTTCAACC
ACGCTGAATT TGGCGCCGGG TTCGTCCGCC TCGGGCGTCG GCTTGCAGAT ACTTAATGGA
TCCACTCCCA TCGCATACGG ACCGGACTCG GCGGCGGCAG GGAATATGAA TCAGTGGTTA
GCAGGCAGAT CAGCGGGCGG CCCCATGACT ATTCCCCTCA CCGCGCAGTA CGTGCGAGCG
TCTGGCGCGC TGGTTCCAGG AACGGTAAAG GCCATCGCGA CGTTCACGAT GTCCTATCAA
TAA
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| Protein sequence | MHNVCFGRRN RMRLAVAIAA SSLALGIAFP AHAACRIVDG FAPAQGVVNW GIVAAPTNVA
IGSVIAKTDM KYDSLFTHQS WHCDGSSFNE YFTMDPRHVL SDIFETNIPG LGVRASVSLV
GEDLFSSIPL NFSLDHSGQN TGKTDDVYVF IELVVTGPID TSATDMLSYN AAGWHHVRDS
FDGNILTLAN LMIYAQINSP TCSVTQSSVA VTLPPAPVAN LSNPNSTTGA TPFNLQLNCS
LSSNVNVTLT DATDVSNRST TLNLAPGSSA SGVGLQILNG STPIAYGPDS AAAGNMNQWL
AGRSAGGPMT IPLTAQYVRA SGALVPGTVK AIATFTMSYQ
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