| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6916 |
|---|
| Symbol | |
|---|
| ID | 6279373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3281552 |
|---|
| End bp | 3282871 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642617943 |
|---|
| Product | Altronate dehydratase |
|---|
| Protein accession | YP_001890579 |
|---|
| Protein GI | 187921547 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2721] Altronate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.152732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.499575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA CTTCCGTAGC ATCTCTGCCT GTCGCCGCGC AGCAGCCCAC GCTCGAAGGC
TATCTGCGTG GCGACGGCCG CAAGGGTATC CGCAACGTGG TCGCGGTGGC GTATCTGGTC
GAGTGCGCGC ATCACGTCGC GCGCGAGATC GTCACGCAGT TTCGCGAACC GCTCGATGCC
TTCGACGATC CTTCCGCCGA ACGCGAGCCG CCCGTGCATC TGATCGGCTT TCCGGGCTGC
TATCCAAACG GTTACGCGGA AAAAATGCTC GAGCGGCTCA CCACGCATCC CAACGTGGGC
GCGGTGCTGT TCGTGTCGCT CGGCTGCGAG AGCATGAACA AGCACTATCT GGTGGACGTG
GTGCGCGCGA GCGGCCGTCC CGTCGAAGTG CTGACGATCC AGGAAAAGGG CGGCACGCGC
AGCACGATTC AATATGGCGT CGACTGGATT CGCGGCGCGC GCGAGCAACT CGCCGCGCAG
CAGAAAGTGC CCATGGCGCT GAGCGAACTG GTGATCGGCA CGATCTGCGG CGGCTCGGAC
GGCACCAGCG GCATCACGGC GAATCCGGCG GTGGGCCGCG CGTTCGATCA TCTGATCGAC
GCGGGCGCGA CCTGCATCTT CGAAGAAACC GGCGAGCTGG TGGGCTGCGA ATTCCACATG
AAGACGCGCG CGGCGCGTCC GGCGCTCGGC GATGAAATCG TGGCTTGCGT CGCCAAGGCG
GCGCGCTATT ACTCGATTCT CGGCCACGGC AGTTTCGCGG TCGGCAACGC GGACGGCGGA
CTCACCACGC AGGAAGAGAA ATCGCTGGGC GCGTATGCGA AGAGTGGGGC ATCGCCGATT
GTCGGCATCA TCAAGCCCGG CGACATTCCG CCGACCGGCG GCCTGTATCT GCTCGACGTG
GTGCCGGACG GCGAGCCGCG TTTCGGCTTT CCCAACATCA GCGACAACGC GGAGATCGGC
GAGCTGATCG CCTGCGGCGC GCATGTGATT CTGTTCACGA CCGGACGCGG CTCGGTGGTC
GGCTCGGCGA TCTCGCCGGT GATCAAGGTA TGCGCGAATC CCGCGACGTA TCGCAATCTC
TCCGGCGACA TGGATGTCGA TGCGGGCCGC ATTCTCGAAG GCCGCGGCAC GCTGGACGAA
GTGGGCCGCG AGGTGTTCGA GCAAACGGTG GCGGTATCGC GCGGTGCCGC TTCGAAGTCG
GAGACGCTTG GTCATCAGGA ATTCATCCTG ACGTACAAGA CGTTCGAACC GGTTGGACCG
GCTTGCCTGC CGTCGAGCGC CGCAGCGCAG CATCGGGTGG TCGCGATCGA GCCGCACTGA
|
|---|
| Protein sequence | MTDTSVASLP VAAQQPTLEG YLRGDGRKGI RNVVAVAYLV ECAHHVAREI VTQFREPLDA
FDDPSAEREP PVHLIGFPGC YPNGYAEKML ERLTTHPNVG AVLFVSLGCE SMNKHYLVDV
VRASGRPVEV LTIQEKGGTR STIQYGVDWI RGAREQLAAQ QKVPMALSEL VIGTICGGSD
GTSGITANPA VGRAFDHLID AGATCIFEET GELVGCEFHM KTRAARPALG DEIVACVAKA
ARYYSILGHG SFAVGNADGG LTTQEEKSLG AYAKSGASPI VGIIKPGDIP PTGGLYLLDV
VPDGEPRFGF PNISDNAEIG ELIACGAHVI LFTTGRGSVV GSAISPVIKV CANPATYRNL
SGDMDVDAGR ILEGRGTLDE VGREVFEQTV AVSRGAASKS ETLGHQEFIL TYKTFEPVGP
ACLPSSAAAQ HRVVAIEPH
|
|---|
| |