| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6911 |
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| Symbol | |
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| ID | 6280471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3276404 |
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| End bp | 3277759 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642617938 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001890574 |
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| Protein GI | 187921542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.414893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TTGCCCTGAT TGCCGACGCC GACCGGCGCG CGCACGCTTA CCTTGCCGAC
ATCGGCAAGC GCCGGGTGTT TCCGGACGCG GCTGCGCTCG CGCAACTCGC CGCCTTCGAC
GAAGCGTTCC CGCAACACGG CCACGCGCCC GCTGACGTGC TGCGTCTGCT CGACGAAAAT
GGTTCGCCCG GCACGGTCGC GTCGAACGAT CCGCGCTATT ACGGCTTTGT GATCGGCGCA
GTGCTGCCGG CGGCTGCGGC GGCCGAGCGT CTGATGGGCG CGTGGGACCA ATGCGCATCG
ACCTTCGATA ACTCGCCGGT TGCGGCCACG CTGGAGAAAA TCGCGGCGCG CTGGGTGCTC
GACGCGCTGG ATCTGCCGCG CGAATCCGCG ATCGGCTTCG GCACCAGCGC GACGGCGTGC
ACGCTCGTTT GCGTCGCGGC TGCACGGCGT GCGCTGCTCG CGCGCAAGGG TTGGGATTTC
GACAATGACG GCTTGAACGG CGCGCCGCCT GTGCGCGTCG TGATCTCCGA GATGGCCCAC
ATCACGGTGA AGAAGGCGCT GCGCGTGCTC GGCTTCGGCA TGAAGCACGT GATTAGCGCG
CCGGTCGATG AGCATGGCCG CATCGACCCC GCGCAGCTAC CGCCGCTCGA CGACATGACG
ATCTTCTGCG TTCAAGCCGG CGAAGTGAAC ACCGGTGAGT TCGATCCGTT CGCGGAATTG
ATTCCGCGCG CCAAAGCGGC CGGCGCGTGG GTTCATGTGG ATGGCGCGTT CGGCCTGTGG
GCGCGGGCAT CGTCAAAGCG GGCGCTGACC GATGGCATCG ATGGCGCCGA CAGTTGGACC
ACCGACGGCC ACAAGTGGCT CAACACGCCC TACGACGGCG CCATGGCGAT CTGCCGCGAC
GCGCAGGCGC TTTCATCGGC GATGAACAGC GACGCGGTCT ACCTGACCGG CGCGCACGAC
GCGCAGAAGA ACGTGAACCT GGAGTTCTCG CGCCGTGCGC GTGGCATTCC GATCTGGGCA
GCGCTGCGTT CGCTCGGACG CAGCGGCGTG CAGGAGATGG TGGACCGGCA TTGCGCGCAG
GCTGCGCGGA TCGCCGAGGG TCTGCGTGCT GCGGGCTTCG AAGTGGTGAA CCGCGTGGTG
CTGAACCAGG TGCTGGTACG CGCGAAGACC GACGCGCAGA CGGTTGCGAT TCGCGAAGCG
GCGCAGGCGT CCGGCGAAAC GTGGTTCGGT CAGACTGTCT GGCAAGGGCG GCCGGCGTTT
CGCATCAGCG TGTCGTCGTG GCGCACTGAA GACGCTCACG TCGATCAGTT AGTGGCGTTG
CTCGCAAGAC TGCTCGCCGA ACACGGCGAG CGCTGA
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| Protein sequence | MNELALIADA DRRAHAYLAD IGKRRVFPDA AALAQLAAFD EAFPQHGHAP ADVLRLLDEN
GSPGTVASND PRYYGFVIGA VLPAAAAAER LMGAWDQCAS TFDNSPVAAT LEKIAARWVL
DALDLPRESA IGFGTSATAC TLVCVAAARR ALLARKGWDF DNDGLNGAPP VRVVISEMAH
ITVKKALRVL GFGMKHVISA PVDEHGRIDP AQLPPLDDMT IFCVQAGEVN TGEFDPFAEL
IPRAKAAGAW VHVDGAFGLW ARASSKRALT DGIDGADSWT TDGHKWLNTP YDGAMAICRD
AQALSSAMNS DAVYLTGAHD AQKNVNLEFS RRARGIPIWA ALRSLGRSGV QEMVDRHCAQ
AARIAEGLRA AGFEVVNRVV LNQVLVRAKT DAQTVAIREA AQASGETWFG QTVWQGRPAF
RISVSSWRTE DAHVDQLVAL LARLLAEHGE R
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