Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6764 |
Symbol | |
ID | 6278079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3096497 |
End bp | 3097132 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617792 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_001890429 |
Protein GI | 187921397 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.406386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.273065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTT CAACCGCCAT CATCACCATC CTGGCCGCAC TGCTGTTAGG CGCCATGAGT CCGGGACCGA GCTTTGTGAT CGTCGCCCGC AATGCGATCG GATTGTCGCG CGGCGATGGG CTCGCTACCG CCCTCGGCAT GGGCGTCGGC GGCGTGTTCT TTAGCGGCAT CGCGTTGCTC GGTCTCTATA CCTTGCTGGC GAGCGTCGAA TGGCTCTATG TCGGCCTGAA AGTGGCGGGT GGGTTGTATC TGATCTACCT CGCGTCGAAA ATCTGGCGCG GCGCGGCCAA ACCGCTTGCG TTCGATGCCT CGCAAGCGGT TTCGGGCAAT GCTCGCAAAT CGTTCTGGAT CGGCTTGAGC ACACAACTCA GCAACCCGAA GACAGCCGTC TATTACGGCA GCATTTTCGC GGCGCTGCTG CCGCAACATC CGCCGCTGTG GTGCTACTTT GCATTGCCGC CCGCGATCTT CGCGATCGAA GCCGGCTGGT ACACCGTCGT CGCGTTGTGT TTTTCGAGCA AGCGGCCGCG TGAAATCTAT CTGCAATGGA AAGCCTGGGT CGATCGCGTC GCCGCGATCG CAGTCGCCGC GCTCGGATTG CGTCTGATTC TGACGGCGCA CAAAGTGGGC ATCTGA
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Protein sequence | MTASTAIITI LAALLLGAMS PGPSFVIVAR NAIGLSRGDG LATALGMGVG GVFFSGIALL GLYTLLASVE WLYVGLKVAG GLYLIYLASK IWRGAAKPLA FDASQAVSGN ARKSFWIGLS TQLSNPKTAV YYGSIFAALL PQHPPLWCYF ALPPAIFAIE AGWYTVVALC FSSKRPREIY LQWKAWVDRV AAIAVAALGL RLILTAHKVG I
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