Gene Bphyt_6764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6764 
Symbol 
ID6278079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3096497 
End bp3097132 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID642617792 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001890429 
Protein GI187921397 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.406386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.273065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT CAACCGCCAT CATCACCATC CTGGCCGCAC TGCTGTTAGG CGCCATGAGT 
CCGGGACCGA GCTTTGTGAT CGTCGCCCGC AATGCGATCG GATTGTCGCG CGGCGATGGG
CTCGCTACCG CCCTCGGCAT GGGCGTCGGC GGCGTGTTCT TTAGCGGCAT CGCGTTGCTC
GGTCTCTATA CCTTGCTGGC GAGCGTCGAA TGGCTCTATG TCGGCCTGAA AGTGGCGGGT
GGGTTGTATC TGATCTACCT CGCGTCGAAA ATCTGGCGCG GCGCGGCCAA ACCGCTTGCG
TTCGATGCCT CGCAAGCGGT TTCGGGCAAT GCTCGCAAAT CGTTCTGGAT CGGCTTGAGC
ACACAACTCA GCAACCCGAA GACAGCCGTC TATTACGGCA GCATTTTCGC GGCGCTGCTG
CCGCAACATC CGCCGCTGTG GTGCTACTTT GCATTGCCGC CCGCGATCTT CGCGATCGAA
GCCGGCTGGT ACACCGTCGT CGCGTTGTGT TTTTCGAGCA AGCGGCCGCG TGAAATCTAT
CTGCAATGGA AAGCCTGGGT CGATCGCGTC GCCGCGATCG CAGTCGCCGC GCTCGGATTG
CGTCTGATTC TGACGGCGCA CAAAGTGGGC ATCTGA
 
Protein sequence
MTASTAIITI LAALLLGAMS PGPSFVIVAR NAIGLSRGDG LATALGMGVG GVFFSGIALL 
GLYTLLASVE WLYVGLKVAG GLYLIYLASK IWRGAAKPLA FDASQAVSGN ARKSFWIGLS
TQLSNPKTAV YYGSIFAALL PQHPPLWCYF ALPPAIFAIE AGWYTVVALC FSSKRPREIY
LQWKAWVDRV AAIAVAALGL RLILTAHKVG I