| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6689 |
|---|
| Symbol | |
|---|
| ID | 6280291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3003748 |
|---|
| End bp | 3004632 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642617719 |
|---|
| Product | DedA family protein |
|---|
| Protein accession | YP_001890356 |
|---|
| Protein GI | 187921324 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.272092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTCCC ATGAATTCAT CGCGCAATAC GGCGCGCTAG TCGTATTCCT GAGTGTGCTT
GGCGCGTCAC TCGGTCTACC TGTGGCCGCT ATGCCCACGC TGATTACCGT AGGGGCCAGC
ATCACAATTG CAACCGGTAG TCAACAATCG GCAGCGTCTC ATTTCGCGGC GACGTTGGGG
GCTGCCGCGT TGGGCGGAGT GCTTGGCGAT CTCGCCTGGT ATGAGGGCGG AAGGCGATTC
AGCGAACGCA CGCTTCGAAC GGTTTGTCTC TTATCGTCGT CGCGTGATAC TTGTGTGAGA
AAAACCGAGC GGTTCTTTGG TCGCTGGGGT GTGCGAGTTC TGATCGTCGC CCGTTTCGTC
CCCGGCCTGT CGCTCGTTGC AGTTCCGTTG TGCGGGGCAA TGGCGGTCAG GATGCGGTAC
TTCATCGCAT GCGATTATGC CGGAGTGGCC TTGTGGGCTT CCGTCGCGCT CGCTATCGGT
GGAGCTTTCG CCGCTCAGGT CGAGCTGGTT TTCGCGGTGA TTTCGCATCT CGGCTGGCGG
GCATTGGCTA TGGTCGCAAG TGCACTCGCG CTGTATTGCT GCTTTCGCCT TTGTCGGTAT
CTCATGCTGT CGAAGGCGCT GAAAACGGCC CGGGTCGATG CAGCGGAGCT ACACGGTTTG
CTAACCGCCG AACCCCGGCC GGTCATCTTC GACATTCGTT CGCCGGAACG GCGGACGCTC
GATCCGTTCG TCATTCCGAG CGCCGTATTC GCCGATGAAC GCAAATTTGC GGAGAGAGTA
CGGGCGTACG ACGCGAACCG GACATTCGTC ATTTACTGCT CGTGCCCGGG AGAAGTGTCC
GCCGCAGGGA CGGCTGGCCG TTTCGGCGCG CCGGAATCAC ACTAG
|
|---|
| Protein sequence | MFSHEFIAQY GALVVFLSVL GASLGLPVAA MPTLITVGAS ITIATGSQQS AASHFAATLG
AAALGGVLGD LAWYEGGRRF SERTLRTVCL LSSSRDTCVR KTERFFGRWG VRVLIVARFV
PGLSLVAVPL CGAMAVRMRY FIACDYAGVA LWASVALAIG GAFAAQVELV FAVISHLGWR
ALAMVASALA LYCCFRLCRY LMLSKALKTA RVDAAELHGL LTAEPRPVIF DIRSPERRTL
DPFVIPSAVF ADERKFAERV RAYDANRTFV IYCSCPGEVS AAGTAGRFGA PESH
|
|---|
| |