Gene Bphyt_6587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6587 
Symbol 
ID6278342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2885800 
End bp2886141 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content64% 
IMG OID642617620 
Producthypothetical protein 
Protein accessionYP_001890257 
Protein GI187921225 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000203689 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0217511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATG CGCTGACGCT GTCCGGCGCG CGCATGGTGA TCATGCGCGG TTTGATCGAA 
CGGGTCGGCA ACGCCGATCA ACTGGCCGGC GTGATGGCGC ACGAAACCGG GCATATCGCG
CGGCGCGATC CGATGGTCGC GTTGTTTCGC GGCGCGGGCA TCGGCGTGAT CAGCGCGACG
CTCGGCATCA TTTTGGTTTT GCCGATGTGT GGTCGCTGGC TGGGCGACTC GTGGGATTGT
CGTATAGCCG CGAGATGGAG CGCCTCGCCG ATGCGAACGG CGTGGCCTAT CTGCAAGCAA
GCGGTTTGCG CAGCGGCGGA CTCGCGGGTT TTTTTGCGTT GA
 
Protein sequence
MVNALTLSGA RMVIMRGLIE RVGNADQLAG VMAHETGHIA RRDPMVALFR GAGIGVISAT 
LGIILVLPMC GRWLGDSWDC RIAARWSASP MRTAWPICKQ AVCAAADSRV FLR