| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6565 |
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| Symbol | |
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| ID | 6280475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2856612 |
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| End bp | 2857667 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617592 |
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| Product | permease |
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| Protein accession | YP_001890235 |
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| Protein GI | 187921203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.200015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00274163 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCAA CCCTTCGACA ACCGCGAGTC GCGCTAGGCT GGATCGTCTT TCTGCTGATC
GCCGTAGTCG GCCTCTTTTA CGTGAAGTGG TTCCCGTACT ACAACCGGGC GTTCGTGGCC
GCGAGCCAGC ACTCCATCGG CAAGTCGATC CTGATGGGCA CGTCGGCGAG CGCGCCGGCG
GCGTCGTGGC AGTCTGCCAT CGACTACGCT CTCGCCTACG GCAAAGCCAT CTGGCAAGCC
ATGGTGCTCG GGCTGCTGCT CGGCTCCGCG GTGCAGGCGC TGATTCCGCC GCAATGGGTC
GCGCGCGCGC TCGGCCGGAC CGATTTCAGC AGCGTGGTGA AGGGTGGCTT GCTGTCGTTG
CCGGGCATGA TGTGCACGTG CTGCGCCGCG CCGGTGGTAG CGGGTTTGCG GGCGCGCCAA
GCAGCGCCGG GCGCGGCGAT CGCATTCTGG CTGGGCAACA CCGCCTTGAA TCCGGCTACG
CTGATTTTCA TGGGCTTCGT GCTCGGCTGG CAGTGGATGG GCCTGCGCCT CGCCTTGGGC
ATCGTGATGG TGTTCGGTCT CGGGTATCTG GTGAACCGCA TGGTGACACC GAAGGAAGCC
GAAGCGTCGC GCGAAGCGAT GGCGCAACTG GTCGCCGTCG ATGTGCCCGG CACCGCTTTC
GCACGCTGGG TGAAAATCCT CGGCACGATG ACGCTGCGGC TCGTTCCCGA ATACATCGTG
CTCGTGCTGA TTCTCGGCGC GGCGCGCACG TGGCTGTTTC CGCACGTCGG ACCGGAGATC
GACAACAGCC TGCTGTGGAT CATTGCGCTG GCCATTGCCG GCACGCTGTT CGTGATTCCG
ACCGCGGGCG AAGTGCCGAT CATTCAGGCC ATGCTCTCGT TCGGCATGGC GGCCGGCCCG
GCAGGCGCAT TGCTGATGAC GTTGCCGCTG ATCAGCGTAC CGTCCATGGC CATGCTCGGA
CGCTCGTTTC CGCGGCGCGT GCTGACGGTC GTGGCGTTGG CCGTCGTCGT GTGCGGCGTG
GTCAGCGGGT TGCTGGCGGT AGCCTTGGGG TTTTGA
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| Protein sequence | MQSTLRQPRV ALGWIVFLLI AVVGLFYVKW FPYYNRAFVA ASQHSIGKSI LMGTSASAPA
ASWQSAIDYA LAYGKAIWQA MVLGLLLGSA VQALIPPQWV ARALGRTDFS SVVKGGLLSL
PGMMCTCCAA PVVAGLRARQ AAPGAAIAFW LGNTALNPAT LIFMGFVLGW QWMGLRLALG
IVMVFGLGYL VNRMVTPKEA EASREAMAQL VAVDVPGTAF ARWVKILGTM TLRLVPEYIV
LVLILGAART WLFPHVGPEI DNSLLWIIAL AIAGTLFVIP TAGEVPIIQA MLSFGMAAGP
AGALLMTLPL ISVPSMAMLG RSFPRRVLTV VALAVVVCGV VSGLLAVALG F
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