Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6546 |
Symbol | |
ID | 6280115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2835674 |
End bp | 2836999 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617576 |
Product | hypothetical protein |
Protein accession | YP_001890219 |
Protein GI | 187921187 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.207505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00680658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGGTTGGC TGTCGTGCTA TGTCGCCCAC GCTGCCGGTT CGCAACTCGA CAGTGAGTGG GCGCGCCTGC GCAAGCAGGC CGATGCGTCA TCGTGGTCGC CTTTTGTGAG CCGTGAGGAC GAGGAAGCGC ACGACTCTGC TGCCGCGATG CGTGACGAAG GTGTAGAAGA GGATGAGCGG CAAGCCATCG ACGATGCCAT TTCCCGGCGT GTCTATATCG AGAAGGAATC GCAGCGGCGG CTCGCTGGCG AGTCGGGCGG CGGTGTCGCT CGAACTGGGC GCAAGCCTCG TGTTCCGAAT GCCGGCTCAA CACATTTGCT GTCCGACTTA ATCACCGCAT GGGCGAAAGA ACGTCAGCCC CAGCCCCGAA CGGTGCAGAT AGCCGAGCGA TGCTCGCGCC GTTTTCGCGA GCTAGTTGGC CCGCTTCCCG TAGAGACGAT AGCCCGGCAG CAGGTCATCC AGTTCAAGGA TGCACTGCTC GCGTCCGGGC AGACTGCCGT GAACACGGAC AAAATTCTCA CCATGTTCTC AACACTGCTC CCGTACGCAC ACGATCAGGG CTGGCTGCCG AGTAACCCCG CGAAGGGGGT AAAAGTCGGC ACGCGCTCCA ACGCAAAGAT GGCCCGGCTT CCGTTCGATC TTCCGGCGCT CAAGCTTCTG TTCGGCTCGA CGATATACAC AGCGGGCGAG CGTCCCGGTG CAGGCGCAGG CGAGGCGGCG TACTGGCTCC CACTGCTCGC GCTGTATGCG GGTGCCCGGC TGGAGGAACT GGCGCAGCTT ACGCCCACCG ACATAAGCGA AACGCCGTAC AGCGATACCA ACGGTGCCCA GCGTACATGC TGGATTTTCA CTATCACGGA CGCAGGCGAG GGGCAGCAGG TCAAGACGGC AGGGTCGCGT CGGCGTGTTC CGATTCATCC TGAACTGATT GCGCTGGGCT TCATCGAGTA CGCCCGGTCG GTCACTGGCC CCCGGTTGTT CCCGGCGCTC AAGCCGAACA ACGAAGGCCG GGAAGGGGCA CTGTTCGGAA AATGGTTCGG CAAACATAAG CGCGCAGTCG GCATTACGGA CAAGCGCATG GTGTTCCACT CGTTCCGGCA CCTGTTCAAG AACGTGATGC GCGAGGCGGG GGTGGACGAG GCGGTTCACG ATGCCCTTAC GGGACGTGGG CGGGGGAGTG GGCCGTACCT ACGGCTCCGG AACACTCTAT CCACTTGCGC CGCTTGTCGA TGCAATGCAG CGGTATCGGA TACATGGTCT GAAGATGCCG CCGCCTTGGA CGGGGCAGTA GTCGACAGGA CTAGCTGGCG CGTCTCGCGT CGCTGA
|
Protein sequence | MGWLSCYVAH AAGSQLDSEW ARLRKQADAS SWSPFVSRED EEAHDSAAAM RDEGVEEDER QAIDDAISRR VYIEKESQRR LAGESGGGVA RTGRKPRVPN AGSTHLLSDL ITAWAKERQP QPRTVQIAER CSRRFRELVG PLPVETIARQ QVIQFKDALL ASGQTAVNTD KILTMFSTLL PYAHDQGWLP SNPAKGVKVG TRSNAKMARL PFDLPALKLL FGSTIYTAGE RPGAGAGEAA YWLPLLALYA GARLEELAQL TPTDISETPY SDTNGAQRTC WIFTITDAGE GQQVKTAGSR RRVPIHPELI ALGFIEYARS VTGPRLFPAL KPNNEGREGA LFGKWFGKHK RAVGITDKRM VFHSFRHLFK NVMREAGVDE AVHDALTGRG RGSGPYLRLR NTLSTCAACR CNAAVSDTWS EDAAALDGAV VDRTSWRVSR R
|
| |