Gene Bphyt_6546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6546 
Symbol 
ID6280115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2835674 
End bp2836999 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content63% 
IMG OID642617576 
Producthypothetical protein 
Protein accessionYP_001890219 
Protein GI187921187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.207505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00680658 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGTTGGC TGTCGTGCTA TGTCGCCCAC GCTGCCGGTT CGCAACTCGA CAGTGAGTGG 
GCGCGCCTGC GCAAGCAGGC CGATGCGTCA TCGTGGTCGC CTTTTGTGAG CCGTGAGGAC
GAGGAAGCGC ACGACTCTGC TGCCGCGATG CGTGACGAAG GTGTAGAAGA GGATGAGCGG
CAAGCCATCG ACGATGCCAT TTCCCGGCGT GTCTATATCG AGAAGGAATC GCAGCGGCGG
CTCGCTGGCG AGTCGGGCGG CGGTGTCGCT CGAACTGGGC GCAAGCCTCG TGTTCCGAAT
GCCGGCTCAA CACATTTGCT GTCCGACTTA ATCACCGCAT GGGCGAAAGA ACGTCAGCCC
CAGCCCCGAA CGGTGCAGAT AGCCGAGCGA TGCTCGCGCC GTTTTCGCGA GCTAGTTGGC
CCGCTTCCCG TAGAGACGAT AGCCCGGCAG CAGGTCATCC AGTTCAAGGA TGCACTGCTC
GCGTCCGGGC AGACTGCCGT GAACACGGAC AAAATTCTCA CCATGTTCTC AACACTGCTC
CCGTACGCAC ACGATCAGGG CTGGCTGCCG AGTAACCCCG CGAAGGGGGT AAAAGTCGGC
ACGCGCTCCA ACGCAAAGAT GGCCCGGCTT CCGTTCGATC TTCCGGCGCT CAAGCTTCTG
TTCGGCTCGA CGATATACAC AGCGGGCGAG CGTCCCGGTG CAGGCGCAGG CGAGGCGGCG
TACTGGCTCC CACTGCTCGC GCTGTATGCG GGTGCCCGGC TGGAGGAACT GGCGCAGCTT
ACGCCCACCG ACATAAGCGA AACGCCGTAC AGCGATACCA ACGGTGCCCA GCGTACATGC
TGGATTTTCA CTATCACGGA CGCAGGCGAG GGGCAGCAGG TCAAGACGGC AGGGTCGCGT
CGGCGTGTTC CGATTCATCC TGAACTGATT GCGCTGGGCT TCATCGAGTA CGCCCGGTCG
GTCACTGGCC CCCGGTTGTT CCCGGCGCTC AAGCCGAACA ACGAAGGCCG GGAAGGGGCA
CTGTTCGGAA AATGGTTCGG CAAACATAAG CGCGCAGTCG GCATTACGGA CAAGCGCATG
GTGTTCCACT CGTTCCGGCA CCTGTTCAAG AACGTGATGC GCGAGGCGGG GGTGGACGAG
GCGGTTCACG ATGCCCTTAC GGGACGTGGG CGGGGGAGTG GGCCGTACCT ACGGCTCCGG
AACACTCTAT CCACTTGCGC CGCTTGTCGA TGCAATGCAG CGGTATCGGA TACATGGTCT
GAAGATGCCG CCGCCTTGGA CGGGGCAGTA GTCGACAGGA CTAGCTGGCG CGTCTCGCGT
CGCTGA
 
Protein sequence
MGWLSCYVAH AAGSQLDSEW ARLRKQADAS SWSPFVSRED EEAHDSAAAM RDEGVEEDER 
QAIDDAISRR VYIEKESQRR LAGESGGGVA RTGRKPRVPN AGSTHLLSDL ITAWAKERQP
QPRTVQIAER CSRRFRELVG PLPVETIARQ QVIQFKDALL ASGQTAVNTD KILTMFSTLL
PYAHDQGWLP SNPAKGVKVG TRSNAKMARL PFDLPALKLL FGSTIYTAGE RPGAGAGEAA
YWLPLLALYA GARLEELAQL TPTDISETPY SDTNGAQRTC WIFTITDAGE GQQVKTAGSR
RRVPIHPELI ALGFIEYARS VTGPRLFPAL KPNNEGREGA LFGKWFGKHK RAVGITDKRM
VFHSFRHLFK NVMREAGVDE AVHDALTGRG RGSGPYLRLR NTLSTCAACR CNAAVSDTWS
EDAAALDGAV VDRTSWRVSR R