Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6502 |
Symbol | |
ID | 6277736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2791370 |
End bp | 2792065 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617536 |
Product | P-type DNA transfer protein VirB5 |
Protein accession | YP_001890179 |
Protein GI | 187921147 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAC GATCGAAGGT AGCTACGTCT GCGCTCGTCT TGGCAGCCGT TTCTCCGGTG GGCTACGCCC AGGGCATTCC GGTATTCGAC GCGCAGAACG TGGCCCAAGC CATTGCGACG GTCGCGCAGC TTGAGCAGGA GGTGCAGCAG GAGATCCAGA TTTACCAGTC GACGGTTGGC ACACGGGGCT TCGGTGCGTT GCTGAACAAT CCGGTGGTGG GAAATTCGCT GCCGTCGAAC TGGCAGGGCG TCTATGCGGC GGTACAGAAC GGCGGCTACG CGGGTCTGAC TGGAAGCGCG CAGGCGCTGC GTTCAGCCAG TAAGATCTAT AACTGTGAAG ACCAGGCCGG CATCGACCAG CAGGTGTGCC AGCGCGCGCT CAACAAGCCG TTCCAGGACA AGGCGTTCGG CCAGCAGGCC TACCAGTCCG AACTGCAGGA ACTGAACCAG GTCCAGAGCC TGATGCAGCA GATCGATGTC ACGCAGGATC CGAAAGGTAT TGCGGAACTG CAGGCGCGCA TCCAGACCGA AACCACGGCG GTCGGCGACG AGATGACCAA GCTGCAGCTC TTCCGGATGC TGGCCGATAC GGAAGACCGG CTCATCGAGG AGCAGCAGAG CGAACTGGTA TTGAGCCGCG CGGGCAATAC CGTCAGGCTG CAGGACCAGA TGGTGCCAGC GTCGTTCGGT AACTGA
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Protein sequence | MKARSKVATS ALVLAAVSPV GYAQGIPVFD AQNVAQAIAT VAQLEQEVQQ EIQIYQSTVG TRGFGALLNN PVVGNSLPSN WQGVYAAVQN GGYAGLTGSA QALRSASKIY NCEDQAGIDQ QVCQRALNKP FQDKAFGQQA YQSELQELNQ VQSLMQQIDV TQDPKGIAEL QARIQTETTA VGDEMTKLQL FRMLADTEDR LIEEQQSELV LSRAGNTVRL QDQMVPASFG N
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