Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6499 |
Symbol | |
ID | 6280311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2789655 |
End bp | 2790485 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642617533 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001890176 |
Protein GI | 187921144 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC TCCGTGTTTC GGTGCTCTGC CTTGTGGGTC TGCTGGTGCT GAGTCCGGTC GCACGGTCCT GGACCGTGCC GGGCTGGTCC GATGACTCAC GGGTGCGGCA GATCGTATAT GCGCCCGACG CCGTCGTGCG CATCAATGCA CAGCGAGGCT TCGCCACCCA TATCGCCCTC GACCCGCATG AGCAGATCCA GGTAGTCGCA CCCGGCGATC GCGATGGCTG GCAGGTGGTG GCGAACAGGG GTGACCACGA CGTTTTCCTG AAACCGCAGC TCGCCGCGCA CAACTCGAAT CTCGAGATCC GTACGGACAA ACGCAGCTAC AGCTTCGACC TGGTGGTGCT GCCCCTGAAG GCGAAATTCG GCAACGGCGA CGAGATATAT CGGGTGACGT TCGTCTATCC GGACGAGCTC AAGGCTCAGA CCCATGCCGA AACCGATGCG GCGCTGGTGG CGCAGCGTCT TGCCCAGCCG TCGGTGGTGC GCAACACCCG GTACTCGATG CAGGTCATGC CGCATTCGGA CGATATTGCG CCGATCGCGG CGTGGGATGA CGGGCGGTTC ACCTGGATCC GCATTCCTGC CAACCGGCGC ATCCCGGCGA TCTTCCGGGT GGCGGATGAC GGTACCGAAA GCGTGGTCGA CAAGCACATG GAGGACGGCA CGATCGTCGT TCACGAGGTG GCGAAGCGCT TCGTATTGCG GCTCGGCGAT GAGGTTGTTG GCATCTGGAA TGACGCATAC GACATGGACG GTGTGCCGCC CAGTGACGGC ACGACGGTCT ATGGTGTGAG GCGTGTTTTG CGGAGTCTGG ATCATGAGTG A
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Protein sequence | MKTLRVSVLC LVGLLVLSPV ARSWTVPGWS DDSRVRQIVY APDAVVRINA QRGFATHIAL DPHEQIQVVA PGDRDGWQVV ANRGDHDVFL KPQLAAHNSN LEIRTDKRSY SFDLVVLPLK AKFGNGDEIY RVTFVYPDEL KAQTHAETDA ALVAQRLAQP SVVRNTRYSM QVMPHSDDIA PIAAWDDGRF TWIRIPANRR IPAIFRVADD GTESVVDKHM EDGTIVVHEV AKRFVLRLGD EVVGIWNDAY DMDGVPPSDG TTVYGVRRVL RSLDHE
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