Gene Bphyt_6499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6499 
Symbol 
ID6280311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2789655 
End bp2790485 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID642617533 
ProductConjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_001890176 
Protein GI187921144 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TCCGTGTTTC GGTGCTCTGC CTTGTGGGTC TGCTGGTGCT GAGTCCGGTC 
GCACGGTCCT GGACCGTGCC GGGCTGGTCC GATGACTCAC GGGTGCGGCA GATCGTATAT
GCGCCCGACG CCGTCGTGCG CATCAATGCA CAGCGAGGCT TCGCCACCCA TATCGCCCTC
GACCCGCATG AGCAGATCCA GGTAGTCGCA CCCGGCGATC GCGATGGCTG GCAGGTGGTG
GCGAACAGGG GTGACCACGA CGTTTTCCTG AAACCGCAGC TCGCCGCGCA CAACTCGAAT
CTCGAGATCC GTACGGACAA ACGCAGCTAC AGCTTCGACC TGGTGGTGCT GCCCCTGAAG
GCGAAATTCG GCAACGGCGA CGAGATATAT CGGGTGACGT TCGTCTATCC GGACGAGCTC
AAGGCTCAGA CCCATGCCGA AACCGATGCG GCGCTGGTGG CGCAGCGTCT TGCCCAGCCG
TCGGTGGTGC GCAACACCCG GTACTCGATG CAGGTCATGC CGCATTCGGA CGATATTGCG
CCGATCGCGG CGTGGGATGA CGGGCGGTTC ACCTGGATCC GCATTCCTGC CAACCGGCGC
ATCCCGGCGA TCTTCCGGGT GGCGGATGAC GGTACCGAAA GCGTGGTCGA CAAGCACATG
GAGGACGGCA CGATCGTCGT TCACGAGGTG GCGAAGCGCT TCGTATTGCG GCTCGGCGAT
GAGGTTGTTG GCATCTGGAA TGACGCATAC GACATGGACG GTGTGCCGCC CAGTGACGGC
ACGACGGTCT ATGGTGTGAG GCGTGTTTTG CGGAGTCTGG ATCATGAGTG A
 
Protein sequence
MKTLRVSVLC LVGLLVLSPV ARSWTVPGWS DDSRVRQIVY APDAVVRINA QRGFATHIAL 
DPHEQIQVVA PGDRDGWQVV ANRGDHDVFL KPQLAAHNSN LEIRTDKRSY SFDLVVLPLK
AKFGNGDEIY RVTFVYPDEL KAQTHAETDA ALVAQRLAQP SVVRNTRYSM QVMPHSDDIA
PIAAWDDGRF TWIRIPANRR IPAIFRVADD GTESVVDKHM EDGTIVVHEV AKRFVLRLGD
EVVGIWNDAY DMDGVPPSDG TTVYGVRRVL RSLDHE