Gene Bphyt_6470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6470 
Symbol 
ID6278228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2746173 
End bp2747369 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content60% 
IMG OID642617504 
Producthypothetical protein 
Protein accessionYP_001890147 
Protein GI187921115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0718502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTC ATATACAACC CAGCATCGGG TGGTTCGTGC TATCGGAAGC TGATCGCGCC 
TCCGCCAATC GCTACCTGGC TTCGCTCGCT TCGGATGGAA CCAGGGATGA ACTTGGCTTT
GCGCCAATCC ACTTCGCTTT CGCCGATCGG CTCTTTCCCG GCACTTCTGT TCAGCACGCT
CAGTTGCGAT ATGTCTTCTT CGTCGCGTGG GGGTATCAGG AGCTATTGGC ACGGACTGCC
GGTCAACGGT TTTCGGTCGA CGAGTTGTTC GAGATTGAAC GTCGCTTTTC GCTTCGTCTT
ATGAGGACGG TGAAGAGTCT CGACAATTCG GGCATCTCTG GCTGGACCAG GTATCAGGCA
GGCGAACGGC CGATAGTTCG AGCGAGCACC ATCTATTGGA CTGCGCTCCG ATCCTGGAAG
ATGGTCGGCG CGGTCGGAGG GGGCGACGGG TCTCCTACGG AGGTGCAACT TCGAAACATC
TGGCCGCAGC TCGTCACCCG GAGCGATGGC GACGAGGGCA AAGCGCTCGT TACCACCCTG
TTCGAAGGGC TGCCAGCGGC TCCAGCCGGT TGGCAGAACA AGACCGGCGA GTTGGACTTC
AGGCTGCGTC GCTGCGAGGC CGAATATCTC CGTCGGAGAT GGAGGGTCGC GGGGGATGGC
GGCGCGCAGC CGCTGCTCAG CCGACTGACG GATGCGGGTG TGAGCACAGA GTCGCTCTGG
AGCGCCCGGG TATTCGACGT TGCGACACCA TCGGAGCGTC GCGCGCTTGT GCTCGCCAGG
CAGGCGGCTT CACTAGCCTG CATTGCCCGC GCGGCCCACT CCGCGCTAGT TGAGGCCAAG
CGCAACGAAG ATCGGGGGCT CTGCGAAAGT CGTCACGCCG ATGCGTTTCC GGATCTGCGA
GATCAACATA AGGAAACAGC GCTTCAGCTT GACGTGGATG CCCTTCAGCG GGAGACCGGC
ATCGACAGGG AGCTCGTCGG CTTTATAAAA GTGGTGACGG GCTGGCTGCG CGATCAGGGA
TCGCTCGAGG CGATCGCCAG GGACTTAACG CTTCGTGAGC GCAGCCTGAA GGAAAGTCGT
GCTTTTCTAC TGAACGAAAA GCGACGTCGG GACTGGAGGA AGGCGGTCGC GACGCCTCTT
GATTACCGAT GGCCCGTCGT CCGAAACATG ATTGATTGCA TTCAGGAGGC TTCATGA
 
Protein sequence
MKSHIQPSIG WFVLSEADRA SANRYLASLA SDGTRDELGF APIHFAFADR LFPGTSVQHA 
QLRYVFFVAW GYQELLARTA GQRFSVDELF EIERRFSLRL MRTVKSLDNS GISGWTRYQA
GERPIVRAST IYWTALRSWK MVGAVGGGDG SPTEVQLRNI WPQLVTRSDG DEGKALVTTL
FEGLPAAPAG WQNKTGELDF RLRRCEAEYL RRRWRVAGDG GAQPLLSRLT DAGVSTESLW
SARVFDVATP SERRALVLAR QAASLACIAR AAHSALVEAK RNEDRGLCES RHADAFPDLR
DQHKETALQL DVDALQRETG IDRELVGFIK VVTGWLRDQG SLEAIARDLT LRERSLKESR
AFLLNEKRRR DWRKAVATPL DYRWPVVRNM IDCIQEAS