| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6446 |
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| Symbol | |
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| ID | 6278455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2717481 |
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| End bp | 2718260 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617481 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890124 |
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| Protein GI | 187921092 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00522333 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 4.08177e-18 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATCTTG AACTTACCGG CAAGGTAGCG ATCGTTGGCG GAGGCAGCCA GGGCATCGGT
TTTGGCATTG CGCGTACTCT CGCAGCAGAA GGTGCTCAGG TTGTGATATC TGCACGGCGC
GAAGAAGATC TGAAGCGCGC GGCGTATGAG ATCCGGGAGT TGACCGGTAA CGCGGTTACG
TGGATCGCCG CCGACTGCCG TAAGGCGGAA GACTGCGAAC GCGTTGCGAC GATCGCACGT
GCGGAATTTG GCGGCATCGA CATTCTTGTC AATAACGATG GCGCACCGCC AGTCGGCCCG
GTGCTGTCGT TCGACGATGC CGCCTGGCAT CGTGCTGTCG AACAGAATTT GATGTATCCC
GTACGAATGG TGCGGCAGGT TGCTGACTCG ATGAAGGAGC GCGGCGGCGG CAGCATTTTG
AACATCACCG CAATCTCCGC GATCCAGCCG ATCCGCGATC TTGGCCTCTC TGTCGCGACC
TGGGGCGGTG TTATTGGCTA TGCGAAGACG CTCTCAATGG AGCTCGCCGA GTTCGGCATC
AACGTCAATA CGATTTGTCC CGGCTATATC GACACGTCGC GTTTGCGAAA AGTATTCGCG
GCCGGCGATG AACCGGACGA GGCGGTGCGC GCGCGACTGC TGCAGGATGT GCCATTAGGG
CGGGTCGGGA GCGTTGATGA CATCGCGAAC CTTGTGGCGT TGCTTGTATC TCCACGCGGC
GCTTACATTA CCGGTACTGC GATTCAGGTC GACGGTGGCC TTCTGCGCGG TGTGCGCTAA
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| Protein sequence | MNLELTGKVA IVGGGSQGIG FGIARTLAAE GAQVVISARR EEDLKRAAYE IRELTGNAVT
WIAADCRKAE DCERVATIAR AEFGGIDILV NNDGAPPVGP VLSFDDAAWH RAVEQNLMYP
VRMVRQVADS MKERGGGSIL NITAISAIQP IRDLGLSVAT WGGVIGYAKT LSMELAEFGI
NVNTICPGYI DTSRLRKVFA AGDEPDEAVR ARLLQDVPLG RVGSVDDIAN LVALLVSPRG
AYITGTAIQV DGGLLRGVR
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