| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6445 |
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| Symbol | |
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| ID | 6280409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2715842 |
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| End bp | 2717470 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642617480 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001890123 |
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| Protein GI | 187921091 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.607182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 3.41608e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATACTAA AACCGACGCA CGAAGTCGCT CCAGCGTTGC AGCAGGCTTA CCGGGACAAA
GGCTGGTGGG GCACGATTAC ATTCAGCGAG ATTCTGGAAC AGCGTGTTAG GGAAATGCCA
GAGCGCATCG CGTTCAAGGA TGACTATCGC GCGGTAAGCT ACGCGCAATT GTGGTCCGAA
GTGCGCCGCT TCGCCGAACT GCTGCGCCGC CAGGGCGTTG GTAGTGGCGA TGTCGTCACG
TTGCAGCTAC CGAACCGTAT CGAATTTCCG GTCGTTTTCT TCGCGCTGGA ACTGATTGGC
GCAGTCGCAA ACAAGATCAG TCCGGACCTG CGAGCGGCGG AATTACGCTA TATCCTTACG
TTCTCGCGGT CCAAAGCGTA TGTGTGCGCC AAGCAAGTCA AGGGCTTCGA CCACGTCGCG
ATGCTGCGCG GATTGCGTGA CGACTTGCCT GAGCCTATTT GTGTGGTGTG TGTCGATCCA
GTCGAAGGCG ACGATGTCAT ATCGTCTGCG GAAGCGCTTC GTGACTTTCC TGCGTTGAGC
GACAAGGACC GCGTGCGCAT GGATTCTGAC GAAATCATGC GCATGTGCTT TACGTCCGGT
ACTACCGGAA ATCCCAAAGG CGTGCTGCAC AGCTTCAACA CGACGTTATG TGCGGCACGT
TTTCTCAACC GCGATATGTA TGTGACGCAA GACGATGTTC TTCTAGCGTA TTTGCCGGTC
GCGCTGAATT GGGGTTATTT GACACTACTG CAATCGGTGA TGGCTGGCGC ATGTACTGTC
CTGCTTGAAC GTTTCTCGGC GCGCGCGGCG CTCGCACGCA TCGCGTCAGA GCGAGTGACA
TACATTCCGA CCGCGCCTGC CGCAATTGTT GCGATGCTTA ACGCTCCGGA GTTGCGCGAC
ACTGACTGCT CGTCCCTGCG CGTGATGGTG ACCGGGGGGG CATCCGCATC GTTGGACATG
ATTAAGGAGT TCGAGACGGC TTTTCCGCTC GCGCGGCTGA TTGAGCTCTA CGGCATGCTT
GAGACGGGCT TCCACTCATA TACGCGGCTT GACGATGATC CAGTAAGGGT GATCGGGACG
GTCGGTCGGT GCGTTGACGA ACTCGAGATC GGTGTGCTCG ACGATCACGG TAGACTGGTC
GAACACGGAC AGACCGGTGA GCTATCCGCG AGAGGGCCGT CGGTGCATCT CGGTTACCTG
GACAACGCGC AGGCTAACGT CGAAAGCTTT ACCAGCGATG GGTGGTTTCG CACAGGCGAT
CTTGGTGAAA TCGTGGATGG GCGCGGTAAT ATCCGCATCT CCGGGCGGAA GAAGGAGATT
ATCAATCGCG GTGGCAAGAA GTATTTCCCG CGCGAAATTG AGGACCTACT GTACGAACAC
CACGTATTCC TGCAGATTGC AATCGTTGGA ATTCCAGATG CGCGACTCGG AGAACGCAAC
TGCTTATGTG CAATCCTGAA ACCCGGTGCA CAGATTACTC TCAATGAGGT TATTGCGTTG
TTGAAGGACC GCGTCGCTGA CTATAAATTG CCGGAGGAAC TTGTAGTTAT GGACGAATTC
CCAATGACGC CTAGCGGCAA GATCAGACGG GCTGAACTGC TTAAGCAACT ATCTTTGCGT
AGTGGATAG
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| Protein sequence | MILKPTHEVA PALQQAYRDK GWWGTITFSE ILEQRVREMP ERIAFKDDYR AVSYAQLWSE
VRRFAELLRR QGVGSGDVVT LQLPNRIEFP VVFFALELIG AVANKISPDL RAAELRYILT
FSRSKAYVCA KQVKGFDHVA MLRGLRDDLP EPICVVCVDP VEGDDVISSA EALRDFPALS
DKDRVRMDSD EIMRMCFTSG TTGNPKGVLH SFNTTLCAAR FLNRDMYVTQ DDVLLAYLPV
ALNWGYLTLL QSVMAGACTV LLERFSARAA LARIASERVT YIPTAPAAIV AMLNAPELRD
TDCSSLRVMV TGGASASLDM IKEFETAFPL ARLIELYGML ETGFHSYTRL DDDPVRVIGT
VGRCVDELEI GVLDDHGRLV EHGQTGELSA RGPSVHLGYL DNAQANVESF TSDGWFRTGD
LGEIVDGRGN IRISGRKKEI INRGGKKYFP REIEDLLYEH HVFLQIAIVG IPDARLGERN
CLCAILKPGA QITLNEVIAL LKDRVADYKL PEELVVMDEF PMTPSGKIRR AELLKQLSLR
SG
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