| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6439 |
|---|
| Symbol | |
|---|
| ID | 6278307 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2710132 |
|---|
| End bp | 2714332 |
|---|
| Gene Length | 4201 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 642923264 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000000012776 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG CGAACCCACT TCCCGACGAT GTCGAAACGC TGAAAGCCAT GCTGCTCAGC
CAGGAGGCGG CACTTCGCGC GCGCGACGCT CAGGTGCTCG CATTGCGAGA AACAGTCGAC
TCGCAACAAG CCGCGTTGGC TTCGCGCGCA GCCGAAGTCG AACACCTGAA GCTGCTTATT
GCCAAGCTGC GCCGTATGCA GTTCGGTCGT GTTGCCTTTC GCCGTAAAGG AGCCGGGTGT
TTTCGGCGTA ATGGCGCCAG TGAAAGGCGC CTGATTCGGG GCTCGAACGG GGATCAAGAA
TCCTTGTTTT TACCTCCTTT CGCAAGTGCT GATTTGTTGC TCTCGGGCAT CGGACGAGGA
ACGCGGTAGC TCTCGCCATC GAGCACGACG CGGTACGCGG CATGTCGCAG GCGATCAAGC
GTTGCGGCGC CGAGCATCTT GTTGGTCGCG AACGCGTCCC CCCATTCCGT AAAATCAAGA
TTGCTGGTCA GGACGGTCGA TGTACGTTCG TACCGTTCGG CGATCAGATC GTGGAAGTCT
TCATCTTCGG GCGTGCGCAT GGGTTTCAGT CCAAAGTCGT CAATGATGAG CAGCGGCACC
TTGGCAAGCG CCTGGAAGCG CCGTTCGTAG GAGCCCACGG CCTGCGCGTT GCGTAGCGCG
CCGAGAAGCC GGGTCTGGGT CATGAACAGG ACATCGTGAC CTTGCCGGGC GGCGGCATGG
CCCAGTGCCT GCGCCAGATG CGACTTGCCC GTTCCGCATG GACCGGCGAT CAGCACGCTG
ACCTTCTCAT CGATAAAGCG GCAGGTCGCC AGATCATGGA CGACAGCACG ATTGAGATTG
GGCAGGCGGT CGAAGTCGAA ACCTTCCAGT GTCTTCTGGC CACGGAAGTT CGCGCGGCGC
ATGCGGGCGT CGAGCTTTCG ATGATCGCGC CGTGCGATCT CGTCCTGGAT GAGCAACGTC
AGGAAGTCGG TATAGGCGAG CTTACGGTCG ATGGCTTCAC GGTTGCGCGC TTCGAGCGTG
TCCAGGATGC CGGACAGTCG CAATTGCTTG AGGGAAGACG TGAGTTCGGG AATTGGATTC
ATGTTCAATG GATCAGGAGG GTCTGGGTAT CGCGGCAGAA GCGCCCGCCG TGGGTGTAGG
TGGTCGCGCT CGATTCAGCG GGTTCGGTCG ACAGCCAGCT CTGGTCGAGG CCTTTCTGCA
GGATCAGCTT GACGGCTTTG TAGCTTGGCG TGCCGAAATG ATTCGCGCGA CGGCAGGCCG
CCTCCAGGCG AGACGCGCCG AACTGCTGGG CGAAGCGCAG CACGCCCTGT ACGGCGCGCA
GCTTGATGAG AACCTGATCG CCGAAGAGTG CGTGAACAAG CGCGTGGCAG GAAGGCCCAA
TACGCTGCGC TTCTCTGAGG CACCATTGGG TGTCGTGCAG TTGCCAGGCC TGTGCGGCTG
GCGGCATGTG ATCGGCCACC GTGCTACGCG TTCCCGGCGC AGTCTGCCGG ACATGCGATG
CCGACAGTTC GTGCTCGTAG TAGAGCTGCA CCATGGTGGC GGTTGCCTTG AGCCACAGAT
CCTTACCGGC AAGCCGGAAC GGCACGGAAT AGTAGGCGCG CTGGAATTGC ACATGGGCGT
CGCGATGGAC CTTCACGCGC GCCCAGGTTG CCAGCTCGGG CTGCACATCG GGAAGCGGCA
GCAACAGCGC CTGTTCGACA TCTTCGAAAC GCTTGAGCGG CACCTCGCGC GTCGTGCCAT
GCGTGCGGGT ACTGGCCTCC TGCATCACCC AGGCTTGCGC TTGCCGGTTG GCGTCGTCAA
GATCACGGAA TTCGCGAAGA GGAAGGAAGC TCGACTTCAC GTATTTGACG CCCGATTCGA
CAATTCCTTT TTTAGCCGGG TCCCTCGGCG GACAAGGATC GACCTTGAAC GAATACCCTT
CGGCGCATTG CGCGTAGGCC CGCTGGACTT CGGGTTCGTA GATACAGGCC TTGACGATGG
CACACTTGGG ATTGTCGATG ATGACGCGTG CGACCACGCC GTTGAACCAC TCGAAGGCAT
GGCGATGACA CAGTAACCAT GTGTCGACAC TCTGGTCGCG GACAAATTCA ACGTACTGAT
GCCGTGACCA GCACAGCGTC ATCACGAAGA ACCACGTCTT GTGGATCTCG CCGGTATGCG
CGTCGGTGAT GGTCGGACCT GCGCCGAAAT CAACCTGTGC GGCGTCGGCA GGTTTGAACT
CCAGCCGCAT TGGTACGTCC GGCGTGAGCT CCGCCTTCAA CTGCTGAAGC AGCCTGTATA
CGGATGAGTA GCTTCCTTCG TAGCCGTGGT TGCGCACCAG CGCGCCGTGA ATCGTCGTGC
CGGGCACGCC CGCGTCGTGC CACTGTGCAA TCTGCTCGCG CCATGGTTCG GCTGACGAGA
TACAGCTCGC TGGCAGGAAT TCCTTGCGAC TAAACGCTGT AGCGAGCTGC GTGTCATCCG
GCAGAGCGTT GCCCGGAGAA AGCCACCCGC GTTCGGTTGC GATCTCACGC ACGGCTGCCA
GCTTCTTACG GCCCATGATC TTCGACCGGT CGATATCCCG GTCGGAGTCA CCCTGGCGCA
TTCGCACCAG AACCTGTCGA TATTGGTACA TCTCGAACTT CCTCTTCAAG CCACCCTCCG
GAGCAAATGC GTGCCGGCAG AGTAGCGGTT GGCGAAGTTC GAGCGCCCGA CTCAGACGCC
AGTGGCGCCT TTACGGCGAA AATCTACTGG CGCCTATACG CCGGAAGACT TGTGGCGCCT
AAACGCCGAA AAGTCCCTGG CGCCTTTATG CCGAAAGCGG TTTGGCTCCT TAGCGGCGAA
AGTTCACAGG TCGCAAGTCG GAGAAGCTGG ACCGTCAGAT CGAGCAACTG GAGCTGCGTC
TCGAAGAGCT TGAGACTGAT GAAGGCGCGG CACCGGTCGA AATCCCGAAG ACGCCGCGCA
CGGCTGTGGA ACAGACACCG CGCAAGCCAC TGCCCGAACA TCTGCCGCGC GAGACCCAGA
CGCACTTGCC CGAATCCGCC GGGAAGTGCA CGCAGTGTGG TGGCCTGATG AAGTCGCTAG
GCGAAGACGT CGCCGAACAA CTTGAGTACG TACCGGCAAG CTTCCGGGTC ATCCGTCATG
TGCGCCCGAA GTTTGCCTGC GTGTATTGCG ACCACATCTC TCAGGCGCCT GCACCGAGCC
GCCCCATCGA GCGTGGTCTC GCCGGCCCAG GGCTGCTGGC GCACGTGCTG GTCTCGAAGT
TCGCAGACCA CATACCGCTT TACCGGCAGT CGGTCATGTA CGCGCGAGAA GGCGTCGAGC
TTGATCGCTC GCTGCTTGCG AAATGGGTCG GTCACGCGGC GACGCTGCTG CAGCCACTCG
TTGAAACACT GCGTGCTCAC GTGATGTCGG CGACGAAGCT GCATGCCGAC GACACACCGG
TTCCAGTGCT TGCTCCGGGC AACGGCAAGA CGAAGACGGG TCGCTTGTGG GTGTACGTGC
GCGATGATCG TGCATCGGCC GACATCACGC CGCCGGCGGT GTGGTTCGCC TACACACCGG
ATCGCAAGGG TATCCATCCG CAGCAGCACC TCAGGTCGTT CAACGGCACA CTGCAAGCCG
ATGCATACGG TGGCTACCAG GCCATCTACG AAACCGGGCG CGTCACGGAG GCAGCTTGCT
GGGCGCACGC CAGACGAAAG TTCTATGAAT TACACGCAGC GCGCCCCAAT GCGTTGAACA
CCGAAGCGCT CGAGCGTATT GGCGCGCTAT ACAGGATCGA GGAAACGATC AGGGGCAAAC
CGCCCGACGA GCGCCGTACG CATCGACAGG AGCACGCGCG GCCGCTACTC GATCAATTCC
ATGCGTGGCT CACGACGACT CTTGAAACGC TCTCGCGCAA ATCAGACACG AGTCGGGCGA
TCCTCTATGC GTTGAACCGA TAGGAAGCGT TCACACGCTA CTGCGATGAT GGCCACCTCG
AAATTGATAA CCTGCCAGTC GAGCGCGCGT TACCCGGGGT GGCCATCGGG CGCCGCAACT
ATCTATTCGC TGGAGCAGAC TCTGGCGGCG AACGTGCCGC CGCCATCTAC AGCCTGGTTG
GCACCGCAAA ACTCATGGCA TCGATCCTGA GGCGTATCTG CGCTACGTGC TCGCACGCAT
CGCCGACCAT GCGATCAATC GCGTTAGCGA ACTCACACCG TGGGTCGTCG CCGAGCAGCT
C
|
|---|
| Protein sequence | |
|---|
| |