Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6389 |
Symbol | |
ID | 6278014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2650253 |
End bp | 2651896 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642617433 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001890076 |
Protein GI | 187921044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGATG AAGCTCAACA TCATCCGCGC GGCAAGAACG GTCGCGCTCC CGATGTATTC GAACGTGGCG GTTGGGTGCC GATGCGCGAG TATCCGAATG ACGAAGAGGT CGACTTCGCG ATCGTCGGCA CGGGTGCGGG AGGCGGTACG CTCGCCTGCC GGCTCGCGGA GCAGGGCTTT AAGGTCGTAG CATTCGATGC CGGCGCATGG TGGCGGCCAC TCGAAGAATT CGCCTCCGAC GAAAGCCATC AGGCGAAGCT CTACTGGACC GACGAACGCA TCTGCGACGG CGAAAACCCG CTCAAGCTCG GCAATAACAA TAGCGGCAAG GCCGTTGGCG GCAGCACAGT GCACTTCGCC ATGGTGTCGC TGCGCTTTCG TCCTGAGTGG TTCAGGTCGC GCAGCGTGCT CGGTTATGGT GCCGACTGGC CGCTCGACTG GCGCGAGATG TGGCGTTACT ACGCGCAGGT CGAAGACGCG CTGAAGATCT CAGGTCCGGT CAATTATCCG TGGGGGCCGA AGCGGCCCCG CTATCCACAT CGCGCGCACG AATTAAATGC TGCGGCGCTC GTGCTTGCGC GCGGCGCAGA GGCGCTGGGC ATCGACTGGA CGGCCACCCC CCTGGCGACG CTGTCGGCGC CGCGCGGCAA GGCGCACCCG TGCGTGTACC GTGGCTTTTG CACTTCGGGG TGCGCAACCA ACGCCAAGCA GAGCGCATTG GTCACGTGGA TTCCGCGCGC GGTGAGTGCC GGTGCGGAAA TACGCGATCT GGCAATGGTT GGACGCATTG CCACGAACGA CGCCGGGCTC GCAACGGGTG TGGAGTATCG GCGCGAAGGC CGCTGGCAGT TCCAGCGTGC GAAGCATGTC GTAGTGGCCG GCTATGCAAT CGAAACGCCG CGTCTATTGC TGATGTCGGC AAATGGCCGC TTTCCGCAAG GCCTTGCAAA CAGTTCGGGC CTGGTTGGCA AAAACCTCAT GGCGCAGTCG AACCAGGCCG TCTACGGCAC GTTCGACGAG GAAATCCGCT GGTACAAAGG ACCACCTTCG TTAGCGATCA CCGAACACTG GAATTACAAG GACACCGGAA AAGATTTCTT CGGCGGCTAT TGCTACATGA GCCAGGGACC ATTGCCCGCC GGCTGGGCGA GCGTACAGAA CGGCCGCGGC TTATGGGGCG ATGCGTTAGC CGGCGAGATG CACAAATACA ATCATCAAGC CGGGTTAAAA ATCGTCGGCG AGACCTTGCC GCAGGAACGC AACCGTGTGA CGCTCGCCGA CGAAAAAGAT CAGTACGGGC TACCCGTGGC GCGGGTGACT TATTCGCTGT GCGATAACGA CAAGCGGCTG ATCGCACACT CCCTGGACTT CATGGAACAG GCGATCCGGG CGGCCGGCGG CAACGAAATA TGGCGGGAAA ATGACGACAC CTGTCATCTG AACGGCACCG CGCGCATGGG CGACGATCCT TCGACCAGCG TGGTCAATGC AGACTGCCGA AGCTGGGACA TACCCAATCT ATGGGTATGC GACGGCTCGG TGTTTCCGAC TGTCGGCGGT GTGAATCCTT CGCTGACCAT TCAGGCGATA GCGTGCCGCA CAGCCGAGCG TATCGCCGCA CTGGCTGCGC GAGGGGAACT GTAA
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Protein sequence | MLDEAQHHPR GKNGRAPDVF ERGGWVPMRE YPNDEEVDFA IVGTGAGGGT LACRLAEQGF KVVAFDAGAW WRPLEEFASD ESHQAKLYWT DERICDGENP LKLGNNNSGK AVGGSTVHFA MVSLRFRPEW FRSRSVLGYG ADWPLDWREM WRYYAQVEDA LKISGPVNYP WGPKRPRYPH RAHELNAAAL VLARGAEALG IDWTATPLAT LSAPRGKAHP CVYRGFCTSG CATNAKQSAL VTWIPRAVSA GAEIRDLAMV GRIATNDAGL ATGVEYRREG RWQFQRAKHV VVAGYAIETP RLLLMSANGR FPQGLANSSG LVGKNLMAQS NQAVYGTFDE EIRWYKGPPS LAITEHWNYK DTGKDFFGGY CYMSQGPLPA GWASVQNGRG LWGDALAGEM HKYNHQAGLK IVGETLPQER NRVTLADEKD QYGLPVARVT YSLCDNDKRL IAHSLDFMEQ AIRAAGGNEI WRENDDTCHL NGTARMGDDP STSVVNADCR SWDIPNLWVC DGSVFPTVGG VNPSLTIQAI ACRTAERIAA LAARGEL
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