| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6275 |
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| Symbol | |
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| ID | 6279446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2532931 |
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| End bp | 2533923 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617330 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001889973 |
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| Protein GI | 187920941 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGG TAAATACTCT GCCGCGCTGC TCGCGGCAAA GTGCCATGAG AACGCAGACG
CGTGAGTTGA CTCGCGTCGA CATAGCGTTG TTTAACGGGT TTGCGCTGCC AAAAGTGGCG
GCAATCATCG AGATCTTCCA GAAAGCGAAC GCATTCGGCG CATCGCAGCA ATTGCATCCG
CGTTACGACG TCTCATTGCT GTCGGCTGCG GGCGGCCGTA TTGCAAGCTC GTCTTCGGTA
TTCGTCTGGA CGGAGAGTGT CGACTCGCAC CAGGTCACGG ATGACAGACA TCTGCTATTC
ATCGCAGGCG GCGCGGGCGT ACCCCATGCC TGCCGCGACG AACGCCTGAG CAATTGGCTG
CGCCGCAGGC ATCCATTCAG CGAGATCGTT CATCCGATCG CCGAGGGCAG ACTGCTCCTG
GAAGCAGCCA AGCTTCCCAG CCGCTACAGT GCCCTCCTAT ATGGCGACAG TGAAACGAGC
GACTACTATC AAGTGCGCGC ACTGAGCGAA GCTCCGACTG AGGTCGCCAC AGCACTGCGT
ATCGTGGAAG AGGATATGGG ATCGGAGGTG GCGCGTCATG TCGCTGAATC GGTTGCGCCT
CAGCAGGATA TGCCTTGGGA CATGTCCGTC TCCCGCAGCG GAGCGCCCAA AGTCAGTGAA
AAGATTATGG CGTCGGCGCG CTGGTTGGAG GAAAACGTCG ACCGGCCTGT TTCTATCGAC
GCGGCCGCGA AGATTGCCGC GATGAGCGAG CGCAACTTCC TGCGCCGCTT CAAGAGCGAG
ATCGGCATGA CCCCCTCCGA CTATCTGCTT CGTGCTCGTC TTAACATGAG TTGCCGGATG
CTCGTCGAGT CGCGCTTGCC TGTCGATAAG ATTGCACGGC GTTGCGGCAT TGGCAGTGGC
GGCCAGTTGG CCAAGCTGTT CAGGAAGTAT CTCGCGACGA CACCCACCGA TTACCGCATG
GGCAGGGAGG CGTCTCCGGC GGAGCAAGCC TGA
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| Protein sequence | MELVNTLPRC SRQSAMRTQT RELTRVDIAL FNGFALPKVA AIIEIFQKAN AFGASQQLHP
RYDVSLLSAA GGRIASSSSV FVWTESVDSH QVTDDRHLLF IAGGAGVPHA CRDERLSNWL
RRRHPFSEIV HPIAEGRLLL EAAKLPSRYS ALLYGDSETS DYYQVRALSE APTEVATALR
IVEEDMGSEV ARHVAESVAP QQDMPWDMSV SRSGAPKVSE KIMASARWLE ENVDRPVSID
AAAKIAAMSE RNFLRRFKSE IGMTPSDYLL RARLNMSCRM LVESRLPVDK IARRCGIGSG
GQLAKLFRKY LATTPTDYRM GREASPAEQA
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