| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6257 |
|---|
| Symbol | |
|---|
| ID | 6278947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2512294 |
|---|
| End bp | 2513229 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642617312 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001889955 |
|---|
| Protein GI | 187920923 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTC ACGATTACAT CTCGTCGGCG AAACGGGTTT TCGCTCTGGA GTCCAGTGCG
ATTGCCGCGC TCGCGTCGGC TCTGGACGAC GACTATCCCC AGGCGATCGC GCGTATTCTC
GAAACGCGCG GCCGTGTGAT CGTATGCGGC ATGGGCAAGT CTGGAATCAT AGGTAAGAAG
ATTGCCGCGA CCTTCGCCAG CACCGGCACG CCGGCGTTTT TCATGCATCC CGGCGAGGCG
TATCACGGTG ACCTCGGGAT GGTCACCAGC GACGACGTAT TTCTCGCCAT TTCAAATTCG
GGCGAGACCC ACGAGGTTGT GCAATTGCTC CCATTTCTGC GAAACAATCA CAATTTCGTG
ATCGCAATGA CGGGTAATCG TGAGTCGACG CTTGCCCGCG CGGGGCATTG TCATCTGGAT
ATCGGCGTCG AGAAAGAGGC TTGTCCGCTG CAACTGGCGC CGACCGCTTC GACGACTGCG
ACGTTGGCAA TGGGCGATGC GCTCGCCGTG ACGTTAATGG AGGCGCGCGA TTTCAAGCCC
GAGGGCTTCG CGCGTTTTCA TCCGGGAGGA TCGCTTGGCC GGCGACTGCT GAGCACAGTG
GGCGATGAGA TGGTTCGCGA CAGGCTTCCG TTCGTCGGGC CCGACGCGAA GGCTATGGAA
ATCGTCAGCG AGATGACGCG CGGCAGTCTG GGGATTGCAA TCGTTCGCGA CGAAACAGGC
TGGGGGCTGA TCACCGACGG TGACGTTCGC CGTTTGATCG AGGTCCACGG ACCCCATGCA
TTCGAAAAAT GCGCGCGAGA CTTCATGTCG AGAGAGCCCA CGATGGTGTC GCCCGCAACG
CGCGTACAGG ACGCGTTGGC CTTGCTCGAC CAACGGCGGA TTACGTCGTT GCTGGTATTC
GAACACCAGC AGATTGTCGG TGTTTTCAAG AAGTGA
|
|---|
| Protein sequence | MTAHDYISSA KRVFALESSA IAALASALDD DYPQAIARIL ETRGRVIVCG MGKSGIIGKK
IAATFASTGT PAFFMHPGEA YHGDLGMVTS DDVFLAISNS GETHEVVQLL PFLRNNHNFV
IAMTGNREST LARAGHCHLD IGVEKEACPL QLAPTASTTA TLAMGDALAV TLMEARDFKP
EGFARFHPGG SLGRRLLSTV GDEMVRDRLP FVGPDAKAME IVSEMTRGSL GIAIVRDETG
WGLITDGDVR RLIEVHGPHA FEKCARDFMS REPTMVSPAT RVQDALALLD QRRITSLLVF
EHQQIVGVFK K
|
|---|
| |