Gene Bphyt_6206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6206 
Symbol 
ID6278709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2456446 
End bp2457801 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content67% 
IMG OID642617261 
ProductMmgE/PrpD family protein 
Protein accessionYP_001889904 
Protein GI187920872 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCA TCGCCGCCGC ATTTGCGCAC GGCCTTTTTG CACTGGCGCA GCGTCCGCTG 
CCGGTTCCGG TCGCAGAGGA AGCCCGGCGC TCCTTGATCA ATGTGATCGG CACGTCGATC
GGCGCCTCGC GGCATCCCGG CGTCGACGCG ATTCTCGCCG CGGCCGCCGA ACTTGGCGTC
GCGCGGATCG CGCCGGTGCC GGGCCGCAGC GAAAAAGTCG ATCTGCATTT TTCAGCGCTC
GCGACCGGCT TTGCCGGCCA TCTCGACGAT TTCGACGACA CCCATCTTGC GACCGTCATT
CACCCCGCGG CTTCGGTGCT CGCCGTGTTG ACCGCTCTCG CGCCCGACAC GCGGCCCACC
GGCGCGGCCG CGCTGAGCGC CTTCACGCTC GGCTGCGAAG CACAGTTACG GGTCGGCGTC
TCGATCTCGC CGGAACATTA CGACCGCGGC TGGCACATCA CCGGCACGTG CGGGGTGGTC
GGCTGTGCGG TAACGGCTGC GCTGCTGCTC GGTCTCGACG AAGCGGGATT GGCGCAAGCG
GTGTCGATCG CGGCCTCGAT GTTTGTCGGC CAGCGCGAAG CGTTCGGCAC GATGACCAAG
CCCTATCACC CCGGCAAGGC AGCCGCAAAC GGCATTGCGG CCGCGCGTCT CGCGCAGCAA
GGCCAGCGCG CCGCGGACGA TATTTTCGAA GCGCCCGGCG GCTACTCGCA TTCGATGTCG
ACCAAGGTCG ACTTCGAACT GATGAACGGC GCGTTCGGCG AGCGCTGGGA ATTGCTCTTC
AACACGTACA AGCCGTATCC GTGCGGCATC GTCGCGCATC CGGCGATCGA CGCGGGCCTC
GCGCTCGCGC CGCAAATCGA CGACGTGCAG TCCATCGAAT CCATCACGCT GCGCTGCCAT
CCGCTCGTGC CCGAACTGAT GGGCAATCCG CAGCCGAAGG ACGGCCTGCA GGCGCGCTTT
AGCGCGATTC ACGGCGTGGC CGCCGCGCTG TGCGACGGCC AGGTCGGTCT CGCGCAATAC
GAGGACGCAC GCGTGGTGCA GGACGACGTC ACGGCGGTGC GCGCGCTGAC GAAGCTCGCG
CCCGACGCCT CGGTCAATCG CGACGAAGTT TTTATCGCGG CCACGCTGAA GGACGGCTCG
GTTATCGAAC ATCACGTCGA ACATGCGCGC GGCAGCCTCG CGCGTCCGCT GACCGACGAG
GAACTGATGC ACAAGGTCCG TCTGCTGGTG GATTCGCAGT TGGGCGACGG CGTCGCCGCT
CAACTCGCCG CCGCCGTGGC GGCACTCGAC ACGGCCGCCA ATCTCGACGC GCTCTTTGCA
CTGTGCGCAC CGTCTGAGGA ACTGAATCAT GCATAA
 
Protein sequence
MSSIAAAFAH GLFALAQRPL PVPVAEEARR SLINVIGTSI GASRHPGVDA ILAAAAELGV 
ARIAPVPGRS EKVDLHFSAL ATGFAGHLDD FDDTHLATVI HPAASVLAVL TALAPDTRPT
GAAALSAFTL GCEAQLRVGV SISPEHYDRG WHITGTCGVV GCAVTAALLL GLDEAGLAQA
VSIAASMFVG QREAFGTMTK PYHPGKAAAN GIAAARLAQQ GQRAADDIFE APGGYSHSMS
TKVDFELMNG AFGERWELLF NTYKPYPCGI VAHPAIDAGL ALAPQIDDVQ SIESITLRCH
PLVPELMGNP QPKDGLQARF SAIHGVAAAL CDGQVGLAQY EDARVVQDDV TAVRALTKLA
PDASVNRDEV FIAATLKDGS VIEHHVEHAR GSLARPLTDE ELMHKVRLLV DSQLGDGVAA
QLAAAVAALD TAANLDALFA LCAPSEELNH A