Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6146 |
Symbol | |
ID | 6279357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2395592 |
End bp | 2396179 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617203 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001889846 |
Protein GI | 187920814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTACT CGCAGGCACA AAAGGCAGAA AGCCGTCAAC GCGTGCTGGA AACAGCGGCG CGGCAGATTC GGGAAGACGG CATCGAGGCG CTCGGCGTGG CGGACTGCAT GCGGCGCGCC GGTCTCACGC ATGGCGCGTT CTACGGCCAC TTCGAGTCGC GTGACGCGTT GATCGTCGAG GCGTTGGAGT ATGCCGTCGC ACTGAGCGAG AAACGGATCG CCACCACGGT TGCGGCGGCA AATGCGAGTG GGTCGGCGAA GAAAGAACCG TTGCGCGTGA TCGCCGAAAT GTTTCTCAGC GAGAAACACA TCAAGGATCC GGGCAACGGC TGCGCGTTGT GCTCGCTTGC CGGCGAAGCG CGGCACGCGG CGCCAGCGGT TCGCGAGAGT TTGACGCAAT ACGTGCACAA GCTCGCGTCG CGCATCGCGC AGACGTTGGC CGGCGACAGC GAAACCCTGG CGCTCGGCAT TGTCGCGACC ATCGTCGGCG CGGTGACGCT GGCGCGTGCC GTCGACGAGC CTGAAACGGC CAGATCGATT CTGGCGGGCT CGCTGGATCT GATCGTGGCG CAAAGCGCCG ACGCCTAG
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Protein sequence | MGYSQAQKAE SRQRVLETAA RQIREDGIEA LGVADCMRRA GLTHGAFYGH FESRDALIVE ALEYAVALSE KRIATTVAAA NASGSAKKEP LRVIAEMFLS EKHIKDPGNG CALCSLAGEA RHAAPAVRES LTQYVHKLAS RIAQTLAGDS ETLALGIVAT IVGAVTLARA VDEPETARSI LAGSLDLIVA QSADA
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