| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6101 |
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| Symbol | |
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| ID | 6279506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2339775 |
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| End bp | 2340995 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617160 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889803 |
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| Protein GI | 187920771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.353681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA ATATCACTAT GACCCGGCTC GCCTGTGCGA TCGCCGCTCT GGCCAGCGCA
CCAGTTTTCG CGCAAAGCAG CGTGACGCTG TACGGTATCG TGGACACGGG TATCGGCTAT
CAAAGCAGCC AGGCGCCCTC GCTCGGTTCG ACCTCCGGCG GCAAGTCCAA AGTGAATATG
ATCAACGGCG TGTGGGCCGG CAGCCGCTTC GGCCTGAAGG GCGCGGAAGA TCTCGGCGCC
GGCACCAAGG CCATCTTCCA GTTGGAGTCG GGTTTCAATT CCGCCACCGG CGCGCAGCAA
TTCTCAAACG CGATGTTCGG CCGCCAGGCA TGGGTCGGTG TGACGAATCC GACTTACGGC
ACGTTGCAGG CCGGCCGCCA GTACACCGCG TACTACTCGA TGTTGTCGCC GTATAGCCCG
ACCACGTGGC TCACGGGCTT CTACGGCGCG CACGCGGGCG ACGTCGACGC GCTCGATACG
ATTTACCGCG CGAACAACTC GCTCGTCTAT ACGTCGCCGA AACTGTACGG CTTCACGTTC
AGCGGTTCGT ACTCGCTCGG CGGCGTGCCG GGCAACCTGA ACCGCGGCTC GACCTGGAGC
GGCGCGGTGC AGTACATCCA GGGTCCGGTC GGACTCGCGG TCGGCTTCAT GCGCATCAAC
AACTCGACGC TCGGCGGCGG CGCATACGGC GCGGATTCGA CCGTGTCGAA CAACGGCGCG
CAACCGGGCG TGTCGGCCGT GACCAACGGC TATCAAACGG CGCAGGCGCA GCAGCGCTTT
GCCGTGACCG GCGGCTATAA CTTCGGCGGC GGCTGGGACG TGTCCGCGGC TTACTCGAAT
GTGCAGTACA TTCCGGGTGT CGGCTCCAGC TTCCGCGATA CGGCGATCTT CAACACGGGC
GGTGTCGTGC TGCACTGGAA GCCGACCGTT TCGTGGGACT TCGCGACCGG CTATAGCTAT
ACGCGCGCCA CCAAGGCGAA CGGCATCACG AGTTCGGCGC AGTATCAGCA GGTCAACCTG
TCCGAGTACT ATTCGTTGTC GAAGCGCACC GGGCTCTATG CATTGCAGGC GTTCCAGCGC
ACCAACGGCA ATACGCTGGG CACTGCGGGC TCGGGCCACA TTATCAGCGC GACGGCAACC
ATCGGCGACG GCTTCCAGAG CGCGCCGTCG TCGTCGCGCA GCCAGTTCGC CGCCGGCGTG
GGCATCGTGC ACCGCTTCTA A
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| Protein sequence | MHRNITMTRL ACAIAALASA PVFAQSSVTL YGIVDTGIGY QSSQAPSLGS TSGGKSKVNM
INGVWAGSRF GLKGAEDLGA GTKAIFQLES GFNSATGAQQ FSNAMFGRQA WVGVTNPTYG
TLQAGRQYTA YYSMLSPYSP TTWLTGFYGA HAGDVDALDT IYRANNSLVY TSPKLYGFTF
SGSYSLGGVP GNLNRGSTWS GAVQYIQGPV GLAVGFMRIN NSTLGGGAYG ADSTVSNNGA
QPGVSAVTNG YQTAQAQQRF AVTGGYNFGG GWDVSAAYSN VQYIPGVGSS FRDTAIFNTG
GVVLHWKPTV SWDFATGYSY TRATKANGIT SSAQYQQVNL SEYYSLSKRT GLYALQAFQR
TNGNTLGTAG SGHIISATAT IGDGFQSAPS SSRSQFAAGV GIVHRF
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