| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6092 |
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| Symbol | |
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| ID | 6279583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2331464 |
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| End bp | 2332132 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617152 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001889795 |
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| Protein GI | 187920763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.350061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAT TCGAACCGAA ATACATCACC TTCGACTGCT ACGGCACGCT GACGAAATTC
CGCATGGCCG AGATGACGCG CGAACAGTAC GGCCACCTGC TCAACGGTGA AGACCTGGAA
AAGCTCATCG CGTTCTACTC GGGCTATCGT CGCGACGAAG TGCTCGGCGC ATGGAAGCCG
TACCGCGATG TGGTGGTCAA TGCGCTGCGC CGCGCCTGCA AGCGCATGAA CGTCGAATTC
AACGAAGCGG GCGCCCAGAG CATCTATGAC GCCGTGCCGA CCTGGGGTCC GCACCCGGAC
GTGCCGGAAG GCGTCGCTCG ACTCGCGAAG AAGTACAAGC TGGTGATTCT CTCGAACGCT
TCGAACAACC AGATCCAGAG CAACGTCGAC AAGCTCGGCG CGCCGTTCTA TAAAGTCTTC
ACGGCGGAGC AGGCGCAATC GTACAAGCCG CGCATGCAAG GCTTCGAATA CATGTTCGAT
CAATTGAACT GCAATCCGGA AGACGTGCTG CACGTGTCGT CGAGCCTGCG CTACGACCTG
ATGACCGCGC ACGACATGGG CATCAAGCAC AAGGCCTTTG TCAAGCGCGG CCACGAACCG
TCGACGCCGT ACTACCAGTA CTACGAGGTC AACGACATTC CGCATCTGGC TTCGGAACTC
GGCCTGTAA
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| Protein sequence | MIEFEPKYIT FDCYGTLTKF RMAEMTREQY GHLLNGEDLE KLIAFYSGYR RDEVLGAWKP
YRDVVVNALR RACKRMNVEF NEAGAQSIYD AVPTWGPHPD VPEGVARLAK KYKLVILSNA
SNNQIQSNVD KLGAPFYKVF TAEQAQSYKP RMQGFEYMFD QLNCNPEDVL HVSSSLRYDL
MTAHDMGIKH KAFVKRGHEP STPYYQYYEV NDIPHLASEL GL
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