| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6052 |
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| Symbol | |
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| ID | 6280354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2286915 |
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| End bp | 2288819 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617112 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_001889755 |
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| Protein GI | 187920723 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.248698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGG GAAACAATTC GCTTGGTAAA AGACGCACGC GCAAGATCGC CATCTCGGTG
GCGGCCGCGC TGATCGCAGT GCTGCTCGCA TTCGGCGTGT GGCATTACCA GCAGCGCGCC
GCGCAGGTCG CGCCTGCGCT GACCGGTGTC GCGAGCCAGA TGCGCCACGA TTCCTCGGCA
TGGACGCACG AAGAAAAAGA CGCCTCGCAA ATGCTGCGCG ATATTCACGA CGCGAAGGTT
GCCGCGATCG GCGTGAGTCC CAACGCGATT TTGATCTCGA AGCGCGACGG CACGAAATAC
TTCGTCACCG ACCATAACGC GACGTTCTCG CATGCGCTGC TGCTCGGCGA GCCGAAGGCC
GACGAAGCCG CCGCGTATCA ACTCGTCTGG CTTCCCGATG CGGATATTCA AACCGGCGGC
TCGCGCTGGG TGCAGGTGTT CGATCAGGTG CGCGACGCCA TCAGCGTGCT GCTGCCGCTG
CTGCTGGTTG GCGGCATGGT GTGGTTCATG CGCCGCGAAA TGCGCGGCGG CGCGACGCTG
CTCGCGAGGG CGCCCGCACT GCGTTTCGAC GACGTGATCG GTGCGGGCGA AGCGAAGACG
GCGCTCGCGG ACATTCGCGG CTATCTGTCC GACCCGAAAC AATTCACGTC GATGGGCGTG
CGCGCGCCGT GCGGCATTCT GATGGTAGGC GGTCCGGGCG TCGGCAAGAC GCGGCTTGCG
CAGGCGCTGG CCGGCGAGTG CGGCGCGAAC TTCATCTCGA TCACGGGCAG CTATTTCAGC
GCGAAGTATT ACGGCGTCGG CATCCAGAAG GTCAAGCATC TGTTCGAACT GGCGCGCAAG
AATGCGCCCA CCGTGATCTT CATCGACGAA GCCGACGGGC TCGCCAAGCG CACGGATACG
GGCAGCGGTC CGGTCGAAGC CGAGAGCAAT CGCATCATCA ATCAACTGCT GGCGGAAATG
GATGGCTTCG CTTCGAACGA AGGCGTGATC ATCGTCGCGG CGACCAATCA CCCCGACAAT
CTGGACGAGG CATTGCGCCG CCCGGGCCGC TTCGATCGCA CCGTGCAGGT CCGTTTGCCC
GATCGCGAAG ACCGCGCGAA GATTTTCCGT TTCTACGCGG AGAAACTGAA GTCGAAAGCC
GCCGACATCG ACTACGATCA ACTGGCGCGG CTGACCACGG GTTTGTCGCC GGCAACGGTC
GCGATGGTGG TGAATCAGGC GGGGCTCGTC GCGCGTAAGT CGGGCGACAC CGAAATCACC
TCGAAGCATT TCATGGAAGC GATCAAGATT GCGCGGATCG GCGACGTGAG CGGCGCCGAG
CGCGCATTGA GCGAAGACGA ACGCACGCGT ATCGCGGTGC ACGAAGCGGG GCACGGTCTC
GTCGCCGCAC TGCTCGGCAC GGGCGTGCTG GAAGAGGTCA CGATTTTGCC GCGCGGCGGT
GCGCTCGGTG TGGCGCTGAT CACGAAAGCG CAGGACAAGC ACCTGTACCG CGAGACCGAG
ATCCGCAACG AAATCCAGGT TTTGCTCGGC GGCCGCAACG CGGAAATTCT AACGTTCTCC
GAAGCATCGA GCGGCGCCGC TTCGGATCTG CAGGAAGCGT CGCGTATCAG CCTCGACATG
GTGTCGAAAT TCGGTTTCAA CAGCGACGGC GATCTGTTCA GCCTCGCGGC GCTGCCGTCG
CAGTACGCGG GTCTGCAAAT GAAGAGCGCT ATCGAGCACG CGAACGTGCT GCTCAAGGAA
TTGAACGAAC TATGTTACGG CTTGCTGCAT GCGTACGAGC CGGTGCTGCG CGCAATTGCG
GACGAATTGC TGGAGCAGGA AACCGTGCCC GGCGAAACCG TGTACCGGTT GATCAAGGAG
CACAAGAGCG CGCTGAAGAT CGTTCACGAG CCGGAAGCGG CTTGA
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| Protein sequence | MKPGNNSLGK RRTRKIAISV AAALIAVLLA FGVWHYQQRA AQVAPALTGV ASQMRHDSSA
WTHEEKDASQ MLRDIHDAKV AAIGVSPNAI LISKRDGTKY FVTDHNATFS HALLLGEPKA
DEAAAYQLVW LPDADIQTGG SRWVQVFDQV RDAISVLLPL LLVGGMVWFM RREMRGGATL
LARAPALRFD DVIGAGEAKT ALADIRGYLS DPKQFTSMGV RAPCGILMVG GPGVGKTRLA
QALAGECGAN FISITGSYFS AKYYGVGIQK VKHLFELARK NAPTVIFIDE ADGLAKRTDT
GSGPVEAESN RIINQLLAEM DGFASNEGVI IVAATNHPDN LDEALRRPGR FDRTVQVRLP
DREDRAKIFR FYAEKLKSKA ADIDYDQLAR LTTGLSPATV AMVVNQAGLV ARKSGDTEIT
SKHFMEAIKI ARIGDVSGAE RALSEDERTR IAVHEAGHGL VAALLGTGVL EEVTILPRGG
ALGVALITKA QDKHLYRETE IRNEIQVLLG GRNAEILTFS EASSGAASDL QEASRISLDM
VSKFGFNSDG DLFSLAALPS QYAGLQMKSA IEHANVLLKE LNELCYGLLH AYEPVLRAIA
DELLEQETVP GETVYRLIKE HKSALKIVHE PEAA
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