| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6042 |
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| Symbol | |
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| ID | 6278423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2275689 |
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| End bp | 2276690 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617102 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001889745 |
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| Protein GI | 187920713 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.184263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACG AATGCGATAC GCTGCCGCAC TGGTTGACCG GTTCGCCGCA AGGTGAAGCC
GGGCACGCGT CGGCAGCATA CAACTCGGCG GTTGCCGCCC AACCGGCTTA CCCGGCCGGC
ACGCGGCAAC TCGAGAAATC AGCCCACGCG GCTGAAGCAT CCAGGGCACC CAACCGCACC
GCAACAGGCG TGGCGCCCGC AGGCTTTCTC ACGCTCTTCA CCGAGGAGGA GATCGGCACG
CCCTCGCCCG CCGCGCGGCG CGCCGCACCC GTCATCAGTC CGCTGGTGCG CTTTGGCAGC
GCGCAGGACC GCATCGAATT CGTGCGGCAG CGCATCAAGC AACTGGGCTT CGACTCGTTC
AGCTATTCGG CCACGCGCAC GTCGGCGCAT CACAAGACGA TGTTCGTGCT GACCAGCTAC
GAGTCGCATA GCTGGCTCAC GCGTTATTTC CGCGAGCGTT ATTTCGAGCT CGACCCGCGC
GTGGCGCTCG CGTCGCCCAC CGGCCTGCCG TTTCTCTGGA ATACGGCCGA CATGCGCGCC
GACCTGCCGC GTGCGCAAAT GCGCAGCGAA AGGCTCGGCG GGCTGATCGA CATGCTGGAA
GTGACCGGGC GCAAAAGCGG CATTCTCACG CAAATGCCGC TGCCGGAACC GGAGCTGAGC
GCGAGCTTGT GCTTCAACTC GGAGATCGGC AATCCGCGCT GGATGACCGA GTCGATCGTA
GCGGAAACGC TCATGTTCGC GCATACGATC CACGAATTCA TCTGGACGCA CGCGAAGAGC
GTGATCGGCA TCGCGCCCGC GCAGCAACAG CGCGTCACGT TGAGCGAGTT GCAGCATGCG
GTGTTGAAGG CGGTCGTGCA GGGTCAGCGG GATAAGGAGA TTGCCTACTT TCTCGGGCTG
TCGCCGCATA ACGTCGATTA CCACTTGCGG CGTTTGCGGC AGTTGTTCAA CGTGCGCAAC
CGCGTGCAGT TGATCAATGT CGCTCAGGCC TATGTGACGT AG
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| Protein sequence | MEHECDTLPH WLTGSPQGEA GHASAAYNSA VAAQPAYPAG TRQLEKSAHA AEASRAPNRT
ATGVAPAGFL TLFTEEEIGT PSPAARRAAP VISPLVRFGS AQDRIEFVRQ RIKQLGFDSF
SYSATRTSAH HKTMFVLTSY ESHSWLTRYF RERYFELDPR VALASPTGLP FLWNTADMRA
DLPRAQMRSE RLGGLIDMLE VTGRKSGILT QMPLPEPELS ASLCFNSEIG NPRWMTESIV
AETLMFAHTI HEFIWTHAKS VIGIAPAQQQ RVTLSELQHA VLKAVVQGQR DKEIAYFLGL
SPHNVDYHLR RLRQLFNVRN RVQLINVAQA YVT
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