| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6038 |
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| Symbol | |
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| ID | 6280345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2268863 |
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| End bp | 2271754 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617098 |
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| Product | YadA domain protein |
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| Protein accession | YP_001889741 |
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| Protein GI | 187920709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.408762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAGT CTTATAAGAT CGAATGGCGT AGCACGACGC GTACATGCGC GGCGGCGTCC
GAGATGGCGA AAAACCGTGG TGGGCGAGGG GTGGCGGGAT ATGGCGCGCT GGTAGCCGCC
GGTACCAGTC TGTTTGGGAC GTTGGTGATG GCTTTGCCTG CGAGGGCGGC CGGCGAGTCG
CCCAACCCGA TCATGAATGC GCCTGTCGAA TGGGATGCCG CCGATCTGGC GACTGTCAGT
CAAACGCCCG ACTCCAACCT GAGCCGTCCA AAAACGCTAA CGCTTGCAAC TGTTGCGTTG
ACCGATCCCG TACCCGTCAC CCAGTTCATT GCCGTCAGTC AGTTCACCAC ACCCGCTTTG
ACGACCTCCG CGTCGGGAGG TGAAAACGCG ATGGCGGTCG GCGTCGGTGC GACGGCCATC
GACACTAACG CGCTCGCAAT CGGCACGAGT TCCGGCGCTG CGCGGGTCAA TACGACCGCC
GTCGGCGCAG GAGCCGCTGC GTTGGCATCC AATGCGACGG TGGTGGGCGC CGGCGCGACC
AGCAACTATT TTGCAGAGAA CGGTGTTGCA ATCGGCTATA ACGCAGCCGT ACAGAACGTC
AATGCGCTGG CTATCGGGAC GAACGTCCAG ACGAACGCGG CGAACTCGAT CGCGGCGGGT
AGCGGCGCCT TTATCGCGGA GGCCGCCACG AAGGCAATCG CGTTTGGTTC CGGCGCGACG
GCCACTGCGG CGGGCTCGGT CGCGTTGGGT GCGGACTCCT CCGCGGACCG TGCGAATACC
GTCTCGGTCG GTAGCGCCAC GCTGCAACGG CAGATCGCCA ATGTCGCGGC CGGCACCCAG
GGCAGCGATG CCGTCACAGT CTCGCAGTTG AAGGGCATGG CGGGCGTGCT GGGAGGCGGC
ACCGACGTTG CCGCTGACGG AACGATCGCG AAGCCCGTCT ATAAGGTCGG TGGGAGGATA
TACAACGATG TCGGCTCCGC GCTAGCGGCC GTCGTCACCA CCAGTACTCA GGCCAGCGCC
GATTCCGTTC AGTACGATTC GACCTCACAC GACAGCGTCA CGTTAGGCAG CGCTGCCGCG
CCGGTTCGGC TCACCAATGT GCGCGCCGCG AACCTCGCTG CCGGCAGTTC GGACGCCGTC
AACGGCGCGC AGCTGTTCGC CACCAATCAG GCCGTCGCGC AGAACACCGG CAGCATTACG
AACCTGGATC AGCGCGTCAC TGACAACACG ACGAACATCA GCAATCTCGA CCAGCGCGTC
ACTGACAACA CGACGAACAT CAGCAATCTC GACCAGCGCG TCACTGACAA CACGACGAAC
ATCAGCAATC TCGATCAGCG CGTCACCGAC AACACGACGA ACATCAGCAA CCTCGACCAG
CGCGTCACCG ACAACACGAC AAGCATCAGC AATCTCGATC AGCGCACCAC GACGATCGAA
GGCGACGTGA GCAACATCAC GAACCAGATC ACCAACGGCG AGATCGGGCT TGTTCAGCAG
GATCAGACCT CGCGCAATCT CACCGTGGCG AAAGACACGG ACGGCGCCCG CGTCGATTTC
ACCGGCACCG GCGGCGCCCG CGAGTTGACG GGCATTGCGG CGGGCACCAC GGACGCATCA
GCGGTCAATC TCGGCCAGTT CAAACCGATG GTGGCCGCGC TGGGCGGCGG CGCGCAGATC
AACGCCGATG GTTCGCTGAC CGGCCCAAGC TATCACGTGC AGGGCGGCAC GCAAACCACC
GTCGGCGACG CGCTCGGCTC GCTCGACAAT GGCCTCAGTA CCTTGCAGCA GAGCATGGAG
ACTGGCGGTA TCGGCATGGT CACGCAGGAC CCCGTGTCGC GCGTCATCAA TGTCGGTGCG
GTGACGGACG GCAAGCTGGT CAATATGGCC GGCACCGCGG GCCATCGCGT CATCACAGGC
GTGGCGGCCG GCGCGGTCAG TCCTGCCAGC AGCGACGCGG TCAACGGCTC GCAACTGTAT
GCGCAGGCGG CCAGCACGGC GGTGGCACTC GGCGGCGGGG CAACCGTCAA CGCGGACGGT
TCGGTCTCGG CACCGTCGTA TAGCGTGGGC GGCACGGTCG TGAACAATGT CGGCAGCGCG
ATCACCAACC TGGATGGCCG TGTGACGCAG AACAGCAGCG ATATTTCCGG TCTGCAGACC
ACCGTTGGCA ATCTTGGCGG CGCGGTCGCG AATGCGGTCC AGTACGACAG CTCGGCGCAT
GACAGGATCA CGCTCGGCGG CGTGGCGGCC AATGCCCCGA AAGTCCAACT GACCAATCTG
CAGGACGGCA CACTATCGGC CACCAGTACC GATGCAGTGA CGGGAGCGCA ACTCTGGAAC
ACCAACCAGA CTGTCAGCAC GCTCAGTCAG CAGATCAACG TGGTGCGGAA CAACCAGACC
ACCGGCAGTC CCTACGTTGC CGTCAACAGT TCCGGTACAG CGGCGCAGGC AATCGGCAAC
GGTTCTGTGG CGATCGGCGG CGGCTCGAAA GCATCGGCGC CGAATTCGGT GGCGATCGGC
GAAGGCTCGG TGGCCGATGT GACGAACACG GTTTCGGTAG GCTCGTCCGG CAGCGAGCGC
CGCATCACCA ACGTCGCCGC CGGGCAGGGC CCAACCGACG CCGTCAACAT GCAGCAGTTC
CAGGGGGGCT TGAGCGACAT GGCGCGCAAC GCCTATTCCG GAACGGCGTC GGCGCTGGCG
CTGACGTCGA TCCCCGAAGT CGATGCCACG AAGAACCTCG CCATCGGCGT CGGAACGGCC
GGTTACAAGG GGTATCAGGC GGTGGCGGTG GGGCTGTCGG CGCGCGTCAC GCAGAGTCTG
AAGGTGAAGC TCGGCGCGGG CATCAGTTCC GCCACGACCG CGGTCACGGC CGGTGCGGCG
TATCAGTGGT AA
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| Protein sequence | MSKSYKIEWR STTRTCAAAS EMAKNRGGRG VAGYGALVAA GTSLFGTLVM ALPARAAGES
PNPIMNAPVE WDAADLATVS QTPDSNLSRP KTLTLATVAL TDPVPVTQFI AVSQFTTPAL
TTSASGGENA MAVGVGATAI DTNALAIGTS SGAARVNTTA VGAGAAALAS NATVVGAGAT
SNYFAENGVA IGYNAAVQNV NALAIGTNVQ TNAANSIAAG SGAFIAEAAT KAIAFGSGAT
ATAAGSVALG ADSSADRANT VSVGSATLQR QIANVAAGTQ GSDAVTVSQL KGMAGVLGGG
TDVAADGTIA KPVYKVGGRI YNDVGSALAA VVTTSTQASA DSVQYDSTSH DSVTLGSAAA
PVRLTNVRAA NLAAGSSDAV NGAQLFATNQ AVAQNTGSIT NLDQRVTDNT TNISNLDQRV
TDNTTNISNL DQRVTDNTTN ISNLDQRVTD NTTNISNLDQ RVTDNTTSIS NLDQRTTTIE
GDVSNITNQI TNGEIGLVQQ DQTSRNLTVA KDTDGARVDF TGTGGARELT GIAAGTTDAS
AVNLGQFKPM VAALGGGAQI NADGSLTGPS YHVQGGTQTT VGDALGSLDN GLSTLQQSME
TGGIGMVTQD PVSRVINVGA VTDGKLVNMA GTAGHRVITG VAAGAVSPAS SDAVNGSQLY
AQAASTAVAL GGGATVNADG SVSAPSYSVG GTVVNNVGSA ITNLDGRVTQ NSSDISGLQT
TVGNLGGAVA NAVQYDSSAH DRITLGGVAA NAPKVQLTNL QDGTLSATST DAVTGAQLWN
TNQTVSTLSQ QINVVRNNQT TGSPYVAVNS SGTAAQAIGN GSVAIGGGSK ASAPNSVAIG
EGSVADVTNT VSVGSSGSER RITNVAAGQG PTDAVNMQQF QGGLSDMARN AYSGTASALA
LTSIPEVDAT KNLAIGVGTA GYKGYQAVAV GLSARVTQSL KVKLGAGISS ATTAVTAGAA
YQW
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