| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5902 |
|---|
| Symbol | |
|---|
| ID | 6279390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2122345 |
|---|
| End bp | 2122836 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642616965 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001889608 |
|---|
| Protein GI | 187920576 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG ATTGCACGCT CGACCGGCTG GACTTGCGCA TTCTCGCCGA ACTGCAAATG
CGCGGCCGCA TGACCAACGT GGAACTGTCC GACGCTGTTG GACTGTCGCC CAGCCCGTGC
CTCACGCGCG TCAAACGGCT CGAGACGGCC GGCTTCATCG CGGGTTACGG CGCGTTGTTG
AAGATCGAGA AGCTCGGCGA TGTCCAGATC GTGTTCGCCA AGATCACACT CGCGGATCAC
CGCCGCGAAG ACTTCGTGCG TTTTATCGAC GCCATTCGCG ACATCGACGA GATCATGGAG
TGCCATCACG CAACGGGCGG CTACGACTAT CTGCTCAAGT TCGTGACGCG CGACATCGCC
CACTACCACA GCGTGATTGA GGGGCTGGTC GAGCGCGACA TCGGGATCCA GACGTACTTC
AGCTACGTGA TTGTGGAATC GCCTATCGTC AGGAAGCGCT GGCGTCTCGA CGCGCTCTTT
ACCGCGAAGT GA
|
|---|
| Protein sequence | MKTDCTLDRL DLRILAELQM RGRMTNVELS DAVGLSPSPC LTRVKRLETA GFIAGYGALL
KIEKLGDVQI VFAKITLADH RREDFVRFID AIRDIDEIME CHHATGGYDY LLKFVTRDIA
HYHSVIEGLV ERDIGIQTYF SYVIVESPIV RKRWRLDALF TAK
|
|---|
| |