Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5822 |
Symbol | |
ID | 6277724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2026237 |
End bp | 2027304 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616886 |
Product | alanine racemase domain protein |
Protein accession | YP_001889529 |
Protein GI | 187920497 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.882286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.608678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGGC GTATGAACAC GCTCGGCGTT GCGTTTCGTC CGCACGTGAA GACCACCAAA TGCATCGACG TGGTCCGCGC GCAGATCGCC GCCGGCGCGC GTGGCATCAC GGTGTCCACA TTGAAAGAAG CCGAGGCGTT CTTCGCCGCC GGTGTCGACG ATATTCTTTA CGCCGTCAGC ATGGTCCCGT CGAAGCTGCC ACGAGCGCTC GCGCTGCGCC GCCAGGGCTG CAATCTGAAG CTGGTGGTCG ACAATCCGAC CGCCGCCTCG GCCATCGCCG CATTCGGCGA TCAGCACGGA GAAACCTTCG AGGTGTGGAT CGAAGTGGAT ACGGACGGGC ACCGTTCAGG CATCACACCG GAACAGGACA CACTGCTCGA AGTCGGCCGG ATTCTGCACG ACAACGGTGT CGAGGTGGGC GGTGTGATGA CCCATGCCGG TTCGAGCTAC GAGCTCGATA CGCCCGAAGC ACTCGCCGCG CTTGCCGAGC AGGAACGCGC CGGCTGCGTG CGGGCCGCAC AGCGGCTGCG CGAAGCCGGC ATTGCCTGCC CGGCGGTCAG CGTCGGCTCG ACGCCGACTG CCCTCGCTGC CACGCAGTTA GAGGGCGTCA CGGAAGTGCG CGCCGGCGTG TACGTGCTGT TCGACCTCGT CATGCACAAC GTCGGCGTGT GCGCGCTCGA CGACATCGCG CTCAGCGTGC TCGCCACCGT GATCGGCCAT CAGGCGGACA AGGGCTGGGC GATTCTCGAC GCGGGCTGGA TGGCGATGAG CCGCGATCGC GGCACGTCGA AGCAGTCGCA CGATTTCGCC TATGGCCAGC CGTGCCTGCT GAACGGCACG GCGCTGCGCG GCTACGTAGT CAGCGGCGCC AACCAGGAGC ACGGCATTCT CTCGCCGACC GCGGACAACG CGGACGCCCA CGACGATGTC ACACAGCGCT TTCCGATCGG CATGAAACTG CGCATTCTGC CCAATCACGC GTGCGCTACC GGCGCGCAGT TTCCCGAGTA TTACGCGGTG GCGCCGGACG GCAACAGCGT GGAGTGGCGG CGCTTTCACG GCTGGTGA
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Protein sequence | MQGRMNTLGV AFRPHVKTTK CIDVVRAQIA AGARGITVST LKEAEAFFAA GVDDILYAVS MVPSKLPRAL ALRRQGCNLK LVVDNPTAAS AIAAFGDQHG ETFEVWIEVD TDGHRSGITP EQDTLLEVGR ILHDNGVEVG GVMTHAGSSY ELDTPEALAA LAEQERAGCV RAAQRLREAG IACPAVSVGS TPTALAATQL EGVTEVRAGV YVLFDLVMHN VGVCALDDIA LSVLATVIGH QADKGWAILD AGWMAMSRDR GTSKQSHDFA YGQPCLLNGT ALRGYVVSGA NQEHGILSPT ADNADAHDDV TQRFPIGMKL RILPNHACAT GAQFPEYYAV APDGNSVEWR RFHGW
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