Gene Bphyt_5822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5822 
Symbol 
ID6277724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2026237 
End bp2027304 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content66% 
IMG OID642616886 
Productalanine racemase domain protein 
Protein accessionYP_001889529 
Protein GI187920497 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.882286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.608678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGGC GTATGAACAC GCTCGGCGTT GCGTTTCGTC CGCACGTGAA GACCACCAAA 
TGCATCGACG TGGTCCGCGC GCAGATCGCC GCCGGCGCGC GTGGCATCAC GGTGTCCACA
TTGAAAGAAG CCGAGGCGTT CTTCGCCGCC GGTGTCGACG ATATTCTTTA CGCCGTCAGC
ATGGTCCCGT CGAAGCTGCC ACGAGCGCTC GCGCTGCGCC GCCAGGGCTG CAATCTGAAG
CTGGTGGTCG ACAATCCGAC CGCCGCCTCG GCCATCGCCG CATTCGGCGA TCAGCACGGA
GAAACCTTCG AGGTGTGGAT CGAAGTGGAT ACGGACGGGC ACCGTTCAGG CATCACACCG
GAACAGGACA CACTGCTCGA AGTCGGCCGG ATTCTGCACG ACAACGGTGT CGAGGTGGGC
GGTGTGATGA CCCATGCCGG TTCGAGCTAC GAGCTCGATA CGCCCGAAGC ACTCGCCGCG
CTTGCCGAGC AGGAACGCGC CGGCTGCGTG CGGGCCGCAC AGCGGCTGCG CGAAGCCGGC
ATTGCCTGCC CGGCGGTCAG CGTCGGCTCG ACGCCGACTG CCCTCGCTGC CACGCAGTTA
GAGGGCGTCA CGGAAGTGCG CGCCGGCGTG TACGTGCTGT TCGACCTCGT CATGCACAAC
GTCGGCGTGT GCGCGCTCGA CGACATCGCG CTCAGCGTGC TCGCCACCGT GATCGGCCAT
CAGGCGGACA AGGGCTGGGC GATTCTCGAC GCGGGCTGGA TGGCGATGAG CCGCGATCGC
GGCACGTCGA AGCAGTCGCA CGATTTCGCC TATGGCCAGC CGTGCCTGCT GAACGGCACG
GCGCTGCGCG GCTACGTAGT CAGCGGCGCC AACCAGGAGC ACGGCATTCT CTCGCCGACC
GCGGACAACG CGGACGCCCA CGACGATGTC ACACAGCGCT TTCCGATCGG CATGAAACTG
CGCATTCTGC CCAATCACGC GTGCGCTACC GGCGCGCAGT TTCCCGAGTA TTACGCGGTG
GCGCCGGACG GCAACAGCGT GGAGTGGCGG CGCTTTCACG GCTGGTGA
 
Protein sequence
MQGRMNTLGV AFRPHVKTTK CIDVVRAQIA AGARGITVST LKEAEAFFAA GVDDILYAVS 
MVPSKLPRAL ALRRQGCNLK LVVDNPTAAS AIAAFGDQHG ETFEVWIEVD TDGHRSGITP
EQDTLLEVGR ILHDNGVEVG GVMTHAGSSY ELDTPEALAA LAEQERAGCV RAAQRLREAG
IACPAVSVGS TPTALAATQL EGVTEVRAGV YVLFDLVMHN VGVCALDDIA LSVLATVIGH
QADKGWAILD AGWMAMSRDR GTSKQSHDFA YGQPCLLNGT ALRGYVVSGA NQEHGILSPT
ADNADAHDDV TQRFPIGMKL RILPNHACAT GAQFPEYYAV APDGNSVEWR RFHGW