| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5821 |
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| Symbol | |
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| ID | 6277547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2025473 |
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| End bp | 2026144 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616885 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) |
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| Protein accession | YP_001889528 |
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| Protein GI | 187920496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.544479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.692522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTTG CCCCCGTGCC TGCCGCCTAT CCCAAAGCGG TCCTGTTCGA TCTTCTGACC
GCCCTGCTCG ACTCGTGGAC CTCATGGAAT CGCGCGGCCG GTTCCGAACA GGCGGGCCGG
GCATGGCGCG CCGCCTATCT GCGGCTGACC TACGGCTGCG GCTCGTACAT TGCGTATGAA
CAACTGGTGC GCGAAGCGGC CGCACAAGTC GGCCTGCCCG AATCAGCCGC GCTCGCGCTC
GAAGCGGACT GGCTGACGCT TACGCCGTGG AGCGGCGCCC TCGACGCGCT GCAAACGCTC
GCCCCGCATT GCAAGCTGGC GGTCGTCACC AACTGCTCCA CGCGTCTCGG CGAACAGGCG
GCTCATCTGC TGCCGGTACG CTGGGACACG ATCGTCACCG CCGAAGAGGC CGGCGTGTAC
AAGCCGGACC CGCTGCCCTA CCGCCTCGCG CTCGAAAAAC TCGGCGTGCA AGCTCACGAA
GCGGCGTTCG TGGCCGGCTC CAGCTACGAC ATGTTCGGCA CCGCCGCCGT CGGCTTGCGG
ACGTATTGGC ACAACCGCGT CGGCCTGCCG CTCGTAGACG GCGCGCAGGC ACCCGAACTC
GAGTCGCCGA CGCTCGACAA ACTTGTCCCG TGGGTCGCTC GCTTCGGCGC AAACCAGCAT
GACCACGCAT AA
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| Protein sequence | MTLAPVPAAY PKAVLFDLLT ALLDSWTSWN RAAGSEQAGR AWRAAYLRLT YGCGSYIAYE
QLVREAAAQV GLPESAALAL EADWLTLTPW SGALDALQTL APHCKLAVVT NCSTRLGEQA
AHLLPVRWDT IVTAEEAGVY KPDPLPYRLA LEKLGVQAHE AAFVAGSSYD MFGTAAVGLR
TYWHNRVGLP LVDGAQAPEL ESPTLDKLVP WVARFGANQH DHA
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