Gene Bphyt_5793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5793 
Symbol 
ID6280041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1997596 
End bp1998615 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content58% 
IMG OID642616858 
Productoxidoreductase domain protein 
Protein accessionYP_001889501 
Protein GI187920469 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG CCTTGCTGGA GGTCAGCCAT TGGCATGTCC CGCTCTATCT TGATGCGCTG 
GAGGCGCCGG GGATTGAAGT GGTCGCCGTG TCGGATGCAG AGCATGTCAA GGGAGAGGCT
ATTGCCGCAC GCTTCGGCAG CAAGTTGTAT TCGTCGGCCT ATGAACTGCT GGAGCGCGAG
GAAGTCGATT TCGCATTTGT GTTCGGGCGG CATTCCGAAA TGCCGGCGCT CGCGGAGGCC
GTGATCGCAA AAAAGATTCC GTTCGCGCTG GAGAAACCGT GCGGTATCAA CATGTCGCAG
GTCACCCGGC TTCGTGCACT GACCGAGGAA GCCAATCTTT ATTGCGCAGT ACCGTTGATC
TTTCGAATGA GCGAATTACT GAGCTCACTC GAAGATGCCG AGGGGCGCAT ACCGTCGGAT
TTCAATTACA TGTCCTTCCG TTTCATCGTG GGACCACCGA GTCGGTACGC AGCAGCAGGC
GCCGGCTGGG CGCTCGACCC CGAGTATTCC GGAGGCGGAT CGACGATCAA CGTCGCTACT
CATTTCATCG ACTTGTTCAG ATTGCTCACG GGCAAGGAGA TCGCCCGAGT CTCCGCGACG
ATGAACTCAA GAACGCATCG GGGCGCGGTT GAGGACTATT CCCTGCTGAC CATGCAGACC
GAAGACGGCG TGATCGGCCT GGTGGAAACG GGATACAGCT TTCCCAGTAC CGCCGACGAG
CAGCGCGAAT TCTCGTTCAC TGTGGCATCC GATCGTATGT ACGCGAAATC CGGCCCGGAC
CGGATCGAGA TACGCGATAG AAACAATCTT TCCGCAGGCA CGCGAAGCCG CCGCCTCCAG
CTTGAAACTG ACATCTACTA CCCCTTGTTC GTCAAGCGGG TACTCGCCGA GTGCCGTACT
GGCGCAAGGC CAATCGCGTC ATTGCGCGAT GCAGAGTTGA TGATGCAGGT CATGGATGCG
GCCTACGCAT CGGCCAGGCA AGGGGGTGCG CTTCAAACTC TCGAGCCGAT TCCCAAGTGA
 
Protein sequence
MRVALLEVSH WHVPLYLDAL EAPGIEVVAV SDAEHVKGEA IAARFGSKLY SSAYELLERE 
EVDFAFVFGR HSEMPALAEA VIAKKIPFAL EKPCGINMSQ VTRLRALTEE ANLYCAVPLI
FRMSELLSSL EDAEGRIPSD FNYMSFRFIV GPPSRYAAAG AGWALDPEYS GGGSTINVAT
HFIDLFRLLT GKEIARVSAT MNSRTHRGAV EDYSLLTMQT EDGVIGLVET GYSFPSTADE
QREFSFTVAS DRMYAKSGPD RIEIRDRNNL SAGTRSRRLQ LETDIYYPLF VKRVLAECRT
GARPIASLRD AELMMQVMDA AYASARQGGA LQTLEPIPK