| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5792 |
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| Symbol | |
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| ID | 6279816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1996636 |
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| End bp | 1997472 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616857 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_001889500 |
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| Protein GI | 187920468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAC ATATCACAGG AACAACGCGA CTTTATGGGT TGGTGGGCGA TCCACTGACG
GCCGCCAAGT CGCCGCAGCT GTTGAACCAG CTTTTTACTG AACAGCGCGT GGACGCAGTT
TGCGTTCCGT TCTGGGTCAA CGCCGCAAAT CTGCCGGCCT TCGTCAGCGG TGCGCGAGCG
ATGGGCAATC TGTCCGGCAT GCTGGTCACC ATGCCTCATA AACAACGGAT GCTCGCGCTT
GTCGACGAAC TTGATCCGAC TGCCCGTCAG GTCGGGGCGC TCAACGTCAT TCGCTGCGAA
CCGGATGGAC GCTGGATTGG CGCGATATTC GACGGCGTTG GCTGCGTTCT TGGGATGCAG
TGGGAAGGCA ACCATCCGGC GAATAAGTCC GTGCTTCTCG TTGGCGCCGG AGGCGCCGGT
AGCGCCATCG CATTTGCCGT CGCGGCTGCT GGCGCTAGCA ACCTAACCAT ATCTGATGTC
GATGAGGCCC GGGCTGGCGG CCTTGCGGCA TCCGTCGCTG CCGAAACAGG ATGCGACGCT
CGTTCGGGGC CACCCGACCC GCAAGGATTC GAGATCGTGA TCAATGCCAC GCCGCTCGGC
ATGAAAGCAA ACGATGCCAT GCCGGTCGAT CCGGAGCGGC TGGCGCACGG CGCCATTGTC
GTCGACATCA TCAATGCGGC CGAGCCGACG CCGCTTCGCC GAGCCGCGCA AGCGCGCGGT
TGCCGCACCC AGGACGGCGG CCCGATGCAT CGGGGGCAGG CCGTCTATGC CCTCAGGTTT
CTGGGCTTCG ATTACCGCCC CGATGGACGA TCAACACCCG ACGACGGCCC GCGATAA
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| Protein sequence | MDPHITGTTR LYGLVGDPLT AAKSPQLLNQ LFTEQRVDAV CVPFWVNAAN LPAFVSGARA
MGNLSGMLVT MPHKQRMLAL VDELDPTARQ VGALNVIRCE PDGRWIGAIF DGVGCVLGMQ
WEGNHPANKS VLLVGAGGAG SAIAFAVAAA GASNLTISDV DEARAGGLAA SVAAETGCDA
RSGPPDPQGF EIVINATPLG MKANDAMPVD PERLAHGAIV VDIINAAEPT PLRRAAQARG
CRTQDGGPMH RGQAVYALRF LGFDYRPDGR STPDDGPR
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