| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5759 |
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| Symbol | |
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| ID | 6280394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1964405 |
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| End bp | 1965640 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642616829 |
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| Product | putative UreA/short-chain amide transport system substrate-binding protein precursor |
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| Protein accession | YP_001889472 |
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| Protein GI | 187920440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA AGCTGTCGGG CTGGATGCGT CTCGCCCTTA CCGCAGGACT CGCACTGACT
TCGCTCGCTT CGAGCGCCGC TGATCCCGTG AAGATCGGCT TGCTCGAAGA CGCCTCGGGG
AATTTCGCGC TGGCCACGAT TCCCAAGATT CATGCCACGG AACTCGCCGT CGACGAGATC
AACGCGAAGG GCGGCATTCT CGGCCGCCCG GTGCAACTGA TCGCCTACGA CACACAGTCG
GACAACACCA AGTTTCAGGA ATTGGCCCGG CGGCTCGTGC AGACCGACAA GCCCGATGTG
ATTTTCGGCG CGTTCTCCAG CGCATCGCGC GAAGCGATCC GCCCGATCAT GGACCGCGCG
CATCAGCTCT ACTGGTACGA CAATCAGTAT GAGGGCGGTG TCTGCGACAC GAACACCTTT
GTTACCGGCG CGGTGCCCGA GCAGCAATTC TCGACGCTCA TTCCGTGGAT GATGCAGAAG
TACGGCAAGA AGGTGTACAC CATCGCGGCC GACTACAACT TTGGGCAGAT TTCGGCGGAG
TGGGTACGCA ACATCGTCAA GGAAAACGGC GGCACGATGG TCGGCGAGGA GTTCATTCCG
CTGTCGGTGT CGCAGTTCGG CCAGACCATC CAGAACATCC AGAAGGCGAA GCCCGACTTT
GTCGTGACGC TGCTGGTCGG CGCAAATCAG TCTTCGTACT ACGAGCAGCA GGCGTCGGCG
CATCTGAATC TGCCGATGGC GAGTTCGGTG AACGTCGGTC AGGCCTATGA GCACAAGCGC
TTCAAACCGC CTGCGCTGAA GGACATGTAC GTGACGGCGA ATTACGTCGA AGAGGTCGAT
ACGCCTGCGA GCAACGACTT CAAGAAGCGC TTCCACGCGA AGTTCCCGAA TGAGCCCTAC
ATCAATCAGG AAGCCGCGAA CGCGTACGAC GCGATCTATC TGTACAAGGC TGCTGTCGAA
AAGGCGAAGT CGACGAATCA GGATCAGGTG CGCAAAGCAC TCGAAAGCGG CGACATCTGC
ACGACCGGCG AGCAGGGCAA GGTCTGTATC GATCCGAAGA GCCATCACGC GAGTCACACC
ATCTTTCTGG TGCACGTGAA GGAGGACCAC TCGGTCGAGA TTCCGAAGGT GTGGGACGAC
GTACAGCCGT ACTGGCTCGG CAAGGTTGGC TGCGATCTGC CGAACAAGCC GGATCATCGT
CAATACACGC CGTCGAACCT GCCCAAGAAG TCCTGA
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| Protein sequence | MSLKLSGWMR LALTAGLALT SLASSAADPV KIGLLEDASG NFALATIPKI HATELAVDEI
NAKGGILGRP VQLIAYDTQS DNTKFQELAR RLVQTDKPDV IFGAFSSASR EAIRPIMDRA
HQLYWYDNQY EGGVCDTNTF VTGAVPEQQF STLIPWMMQK YGKKVYTIAA DYNFGQISAE
WVRNIVKENG GTMVGEEFIP LSVSQFGQTI QNIQKAKPDF VVTLLVGANQ SSYYEQQASA
HLNLPMASSV NVGQAYEHKR FKPPALKDMY VTANYVEEVD TPASNDFKKR FHAKFPNEPY
INQEAANAYD AIYLYKAAVE KAKSTNQDQV RKALESGDIC TTGEQGKVCI DPKSHHASHT
IFLVHVKEDH SVEIPKVWDD VQPYWLGKVG CDLPNKPDHR QYTPSNLPKK S
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