| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5731 |
|---|
| Symbol | |
|---|
| ID | 6280384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1932720 |
|---|
| End bp | 1933652 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642616801 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001889444 |
|---|
| Protein GI | 187920412 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.194082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA CAACCCGTAA CGTGCAGCCT GTCACCGCCA ATCTTGGCAA AGAAGGTTCT
GGCGAACTCG TGCCTTCCCG CTACGCCGTA CGCGTGGGGG ACGTCGATGT CGTATTGATC
AGCGATGGCG TTCTGCCGCT GCCGACCTCT ACCATGTCCA CTAATGTGAG CGAAGCGGAC
CGCAACGCAT GGTTCGATGG GCGTTTCCTG CAACGCGACA TGTTCGACTG GGCGCTGAAT
GTCGCGCTTG TGCGCAGCGG CGAACGCCTG ATTCTTATCG ACTCGGGCGT GGGTGACGGT
TTCGAGTACT TCGCGCGCGC CGGCCGGTCG GTGATGCGAC TGGAATCGGC TGGTATCGAT
CTGGCTGCGA TCACCGACAT CGTCATTACG CATATGCACA TGGATCACGT CGGCGGGCTG
AACGTTGACG GCGTCAAGGC CAGGCTGCGT CCGGACGTGC GCATTCACGT GTCGGCTGCG
GAAGTGGAGT TCTGGAAAAA TCCCGACTTC AGCAAGACTG TGATGCCGGA AACAGTTCCT
CCCGCACTTC GCAAGGCTGC CGCAAAATTC GTGGAACTCT ATGGCGAAAA CATCGTGCGA
TTCGATCAGA CCGTGGAAGT CGCAGCGGGC GTATCGGCCC GCGTGACGGG TGGACACACG
CCGGGACACT GCGTCGTGGA CGTCGCGTCA AAGGGCGAGA AGCTGACGTT CGTAGGCGAC
GCGATTTTCG AAGTCAACTT CGACAATCCC CGCTGGCAAA ACGGCTTCGA ACACGAGCCT
GAGATCGCTG CGGATGTGCG TATCGCGCTG CTCAACGAAG CCGCCGAAAC CGGCGCTCTA
CTGGCCGCAG CGCATGTCGC GTTCCCGTCT ATTGGTCACA TTGCAAAGAA CGGCGAAAGC
TTCCGTTTCG TGCCGGTTCA GTGGGACTAC TGA
|
|---|
| Protein sequence | MSETTRNVQP VTANLGKEGS GELVPSRYAV RVGDVDVVLI SDGVLPLPTS TMSTNVSEAD
RNAWFDGRFL QRDMFDWALN VALVRSGERL ILIDSGVGDG FEYFARAGRS VMRLESAGID
LAAITDIVIT HMHMDHVGGL NVDGVKARLR PDVRIHVSAA EVEFWKNPDF SKTVMPETVP
PALRKAAAKF VELYGENIVR FDQTVEVAAG VSARVTGGHT PGHCVVDVAS KGEKLTFVGD
AIFEVNFDNP RWQNGFEHEP EIAADVRIAL LNEAAETGAL LAAAHVAFPS IGHIAKNGES
FRFVPVQWDY
|
|---|
| |