Gene Bphyt_5713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5713 
Symbol 
ID6277599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1915246 
End bp1915569 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content54% 
IMG OID642616786 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_001889429 
Protein GI187920398 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA AACCTACTGT GGCGCGGCAG GCATTTGGCG CCATCGCGCC GAAACTCGCT 
GAAATCAGCG ATGAAGTTCT CTTTGGCGAT ATCTGGGAGC GTCCGCAATT ATCGAAGCGC
GACAGAAGCC TTATTACTTG CGCGACCCTC ATCGCTCTAT GCAAGGTCGA GCAGATGAAC
TTCCACATGC CGCTTGCAAT CCAGAATGGA GTGACTCACG ACGAACTCGT CGAGATGACT
ACGCATCTGG CCTTCTACGC CGGATGGCCG AGTGCGATGT CAGCGGTAAC GAAGCTCAAG
GAGCTCTTTC CCACTACCGA TTAA
 
Protein sequence
MTSKPTVARQ AFGAIAPKLA EISDEVLFGD IWERPQLSKR DRSLITCATL IALCKVEQMN 
FHMPLAIQNG VTHDELVEMT THLAFYAGWP SAMSAVTKLK ELFPTTD