| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5628 |
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| Symbol | |
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| ID | 6278550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1832168 |
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| End bp | 1833067 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642616702 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001889345 |
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| Protein GI | 187920314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.275597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATC TTGATCTACA GAGCCTTCGT ATCTTTGTTT CGGCTATTGA GTCAAAGAGC
TTGACCAAGG CGGCAGAAGA GAATGCCCTT GTAACTTCAG GAGCCAGCAA GCGAATCGCT
GACCTCGAGA GCCGGCTCGG AGTCGATCTT TTGATCCGTC ATGCGCGTGG CGTTCAGGGT
ACGCCTGCGG GTCTGTCGTT ATATCATCAT GCAAAAGCAA TCTTGCGCCG TGTAGAAATA
GCACAAGACG TTGTCGCTGA ATTTGGAAAG GCGGGAAATC CCAAAGTCAG GCTAGCCGCA
AATCCATCAT CAATCATTGC GTATATACCT CCAATAACGC GGAGATATCT TTCGGAGTCT
CCTACCGCTC GCATTGATCT GCAAGAGCGC TACAGCTACG ACATTCCGCG GTTGGTCGCG
GAAAATGAAG CAGACGTCGG CATTTATCAC GCATTGTCGC CGGCGCCAGG AGTAACATCT
TATCCGTTCA AGCGGGACCG TATTGTCCTT GTCACACGCC GAGATCACCC ACTCGCGCGT
TTTGATGAGC TTTTCCTGGA ACATGCCAAT TCGTACCCCT TCGTGGGATA CTTTCCACGG
CACACCTATG ACGCATTCTC ATCGTTTGCT GGACGAAGCT TGTCACGTCC GCTCGATGTC
AAAATTGAAG TTGGGAATTA CGAAGCCAGA TGCCGTCTCA TTCAAGAAGG GATAGGAATT
GGCGTGATTC CGGAACCAAA CGCCTCTCCC TATCTAAATC TTTATAATCT AAAAGCGCTC
AAACTGCTGG ACGAGTGGGC AGAGCGACAA CTTTACGTTT GCATTTCGAA TGATAGAGAT
TTATCGGACT ATCCCGAGAC GAAACGTTTC CTCGATTGCT TATTAGCTAA ATCTGATTGA
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| Protein sequence | MMNLDLQSLR IFVSAIESKS LTKAAEENAL VTSGASKRIA DLESRLGVDL LIRHARGVQG
TPAGLSLYHH AKAILRRVEI AQDVVAEFGK AGNPKVRLAA NPSSIIAYIP PITRRYLSES
PTARIDLQER YSYDIPRLVA ENEADVGIYH ALSPAPGVTS YPFKRDRIVL VTRRDHPLAR
FDELFLEHAN SYPFVGYFPR HTYDAFSSFA GRSLSRPLDV KIEVGNYEAR CRLIQEGIGI
GVIPEPNASP YLNLYNLKAL KLLDEWAERQ LYVCISNDRD LSDYPETKRF LDCLLAKSD
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