| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5581 |
|---|
| Symbol | |
|---|
| ID | 6278233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1782113 |
|---|
| End bp | 1782943 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616659 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001889302 |
|---|
| Protein GI | 187920271 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.351015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGCA AAACCCTGCT GGTGCATCTG GACGACAGCA CCCATAGCGC TGCCCGCACC
CAATTCGCGC TCGACTTGGC CCGGCGCCAT GAAGCGCATT TAATCGGCTT GTACGTGGTG
TGCCGGGAAC TCACTCAGCC GCTCTTCCTA CACGGCGAGA GCGGCTGGGC CGAAGCACGG
GAGGCGCAGC TCAGCTCAAA CCTGAACGAC GCGCGAGCGC GCTTTCTCGC AGCCGGCGAA
CTTGCCGGCG CCAGCGTCGA GTGGCGCGCG CCGGCCGGTG CCACCGTCGA TACAACAGTC
TTGCATGCTC GCCACGCCGA TCTTCTGATT CTCGGCCAGT ACGATCCGCA CGACCCTTCG
TCGTATATCG CCCGCCACTT CGTGGAGGAC GTGGTCATGA GTTCGGGCCG CCCGGCGATC
GTGTTGCCCT ACGCGGGGGA AGTCCGCTCG TTTGCGGAAA GCGTGCTGAT CGCATGGGAC
GGCAGCCGCG AGAGCGCGCG ATCCATGGCC GATGCGCTGC CCGTGATCAA ACGCGCGAAA
TTCGTCACGG TGATGACCGT CCGGCGGCAT CCATCAAGCG GCGGCGAGCC GGCCGGCATC
AGTGTCGCCG CGTGGCTCGC GCGGCACGGC ATTCAGGCGG GATTTGCCGA TTCCGCCACG
ACGGACGGGG TCTCGACAGG CGCGCTCCTG CTGAACATGC TCACCGACCT TCATGTCGAC
CTGCTGGTGA TGGGCGCGTA TGGCCATGCG CGCGTTCAGG AAAGGTTGCT GGGCGGCGTC
ACGCGGACCG TGCTGGAGTC GATGACCGTG CCGGTGCTGA TCTCGCATTA G
|
|---|
| Protein sequence | MTCKTLLVHL DDSTHSAART QFALDLARRH EAHLIGLYVV CRELTQPLFL HGESGWAEAR
EAQLSSNLND ARARFLAAGE LAGASVEWRA PAGATVDTTV LHARHADLLI LGQYDPHDPS
SYIARHFVED VVMSSGRPAI VLPYAGEVRS FAESVLIAWD GSRESARSMA DALPVIKRAK
FVTVMTVRRH PSSGGEPAGI SVAAWLARHG IQAGFADSAT TDGVSTGALL LNMLTDLHVD
LLVMGAYGHA RVQERLLGGV TRTVLESMTV PVLISH
|
|---|
| |