| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5562 |
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| Symbol | |
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| ID | 6280488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1766577 |
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| End bp | 1767227 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616643 |
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| Product | transport-associated |
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| Protein accession | YP_001889286 |
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| Protein GI | 187920255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.221455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAG ACATGGAATT GAAACACGAG GTCGAGGAGG AACTGGCCTG GGACCCGGCA
GTGAGCGTCA CAGACATCGG CGTGGAGGTT CATGACCGTA TCGTCACGCT GTCCGGTCAT
CCGGCCAGCT ATGCGGAAAA AATCGCGGCG GAGAAAGCGG CGCAACGTGT CGCGGGCGTG
AAGGCCGTCG TTGTGGAACT GAAGGTGCGC CTCGGGCATG CGGATGTTCG CAGCGACGAA
GACATCGCCA ACGCGGTTCG TTCCGTTCTC CATTGGACCG TCGGCTTAAG CGAAGAGTCC
GTCAAGGTGC AGGTTGAAAA AGGCTGGGTC ACATTAAGCG GCGAAGTCGA CAATGCCTAT
CAGAGTCATG TCGCCGCCCG CACTGTTTCG CAAATGCGCG GCGTGACGGG CGTATCGAAC
ACGATCCGCA TCAGTGGAAG CGTGGCCGCA CAGGACATTG GCGAGCAGAT CAGCCAGGCG
CTTCAGCGTC ACGCGGACCG TGAGGCGAAA CATATAGCGA TCAAGGTGGA TCAAGGCACG
GTAACGTTGA CGGGCAAGGT TGATTCGGCC GCCGAGCGTT CGGCTGCGCG CGGGGCCGCG
TGGGCAGCGC CGGGCGTGCA TGCCGTAATC GACAATCTGA CGGTGGGCTG A
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| Protein sequence | MKSDMELKHE VEEELAWDPA VSVTDIGVEV HDRIVTLSGH PASYAEKIAA EKAAQRVAGV
KAVVVELKVR LGHADVRSDE DIANAVRSVL HWTVGLSEES VKVQVEKGWV TLSGEVDNAY
QSHVAARTVS QMRGVTGVSN TIRISGSVAA QDIGEQISQA LQRHADREAK HIAIKVDQGT
VTLTGKVDSA AERSAARGAA WAAPGVHAVI DNLTVG
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