Gene Bphyt_5552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5552 
Symbol 
ID6278547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1759233 
End bp1760081 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID642616633 
ProductH+transporting two-sector ATPase gamma subunit 
Protein accessionYP_001889276 
Protein GI187920245 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AACTTGCGGA AATCGAGTCG CGCAGCACCA CGGCGCAGCA ACTCGACGCT 
GTCATCGGTG CCATGCGCGG CATCGCGGCC GCCCGCTCAC GCGAGGCTCA GGGGCGACTG
CCTGGCATTC GCTCCTCGGC GTCGACCGTC GGCGCCGCGA TCGGTGGCGT GCTTGCCCAT
GGCGCCGGGA CATCGGCGGA TACGCCCGAG CGCGGCACCC AGATCGTTAT CGCGTTGTGC
GCGGAGCAAG GATTCGTGGG CGCGTTCAAC GAGCAGATTC TCGACCACGC GCTAGTCCGT
CACGCGTCGG CGGATTGCGA GTTCCTGGTG GTGGGAACAC GTGGTGAGAT CGCGGCGCAC
GACCGTCGCG TTGCGCTCGT GTGGAGTTCG CCGGCGGCTT CCCATGCCGA CGATGTGCCC
ACACTCGCCA GCCGCCTCAC CGACGCGCTT TACCAGCGCC TCGACCAGCG GCCCATCACC
GGCGTTTGCG TCATTCATGC CGTGCCCGGG ATCGCGTCAC ATAACGAAGT CGTCGAACAC
CGTCTTATTC CGTTCGATTT TTCGCGTTTC CAGGTCGTGC GGCGCAATCA GCCGCCTCTA
CTGACGCTGC CCGTCGGGCG CCTGCTTTCG GGGCTAATCG AAGCGTATGT GTATGTGGAA
TTGTGCGAGG CGTTGATGCT CTCGTTCGCT GCGGAAAACG AAGCGCGTGT GCGAGCTATG
CTGGCCGCAC GCGGCCATGT GAAGGAGACG CTTGAAGAAC TGACGCAACG TTACCGCCGG
GTCCGTCAGG ATGAAATCAC GGCCGATATC GTCGAACTGG CGGCGGGCGT GGTGCAACGG
TCGACGTGA
 
Protein sequence
MSGKLAEIES RSTTAQQLDA VIGAMRGIAA ARSREAQGRL PGIRSSASTV GAAIGGVLAH 
GAGTSADTPE RGTQIVIALC AEQGFVGAFN EQILDHALVR HASADCEFLV VGTRGEIAAH
DRRVALVWSS PAASHADDVP TLASRLTDAL YQRLDQRPIT GVCVIHAVPG IASHNEVVEH
RLIPFDFSRF QVVRRNQPPL LTLPVGRLLS GLIEAYVYVE LCEALMLSFA AENEARVRAM
LAARGHVKET LEELTQRYRR VRQDEITADI VELAAGVVQR ST