| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5551 |
|---|
| Symbol | |
|---|
| ID | 6278248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1758543 |
|---|
| End bp | 1759040 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642616632 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001889275 |
|---|
| Protein GI | 187920244 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.883405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACA CGATCCTGTT GGCCATAGAC GGAAGCGAAG CCTCGCTTCG GGCGCTGGAC
CACGCTCTCG ACATTGCAAC ACTCGCGCAC GCGCGCCTGC ACGCTGTCTA TATCGTTCAT
CCCTGGCGTG TGTCGGAGTA CGCCGGCTAC TATGATCCGG GGGACCTCTG CAAGGTACTC
CGCGAAGATG CCAAGGTCGC ATTGGAAGCT GCCCGCACGG CGATGGCCAG ACGTGGTGTG
AGGGGTACGA CGGAAATCGT CGAGACGCAG AGTGCCTCGG ACGATATCGC GAGCTGTCTG
CAACGCTGCG CCCAGCTCCA CGAAGCTGCG CTTGTCGTGA TGGGTACGCA CGGCAGGCAC
GGTGTGGCCA GAGCCGTGCT CGGCAGCGTC GCCGAGCAGT TTCTGCGGAT GTCTAGGTGC
CCCGTGTTGC TGGTTCGAAG CAGCGCGAAC CTTGGTGACC GGAGCGCTTC TGCGTCTGTA
TCGAGCACGC CCGGATAA
|
|---|
| Protein sequence | MYHTILLAID GSEASLRALD HALDIATLAH ARLHAVYIVH PWRVSEYAGY YDPGDLCKVL
REDAKVALEA ARTAMARRGV RGTTEIVETQ SASDDIASCL QRCAQLHEAA LVVMGTHGRH
GVARAVLGSV AEQFLRMSRC PVLLVRSSAN LGDRSASASV SSTPG
|
|---|
| |