| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5531 |
|---|
| Symbol | |
|---|
| ID | 6278775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1739322 |
|---|
| End bp | 1740071 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642616613 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_001889256 |
|---|
| Protein GI | 187920225 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2169] Adenosine deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.73484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.25231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACTT TTGATCCAGA CGGCGTCGAG CAACCGGTCT TCGTGATCCG CGAGCACCAC
GAGACGCTGG ACGAACCGTT GGGCGCCTAT CGTCGCGCGC GGCTGATCCA CGTGAGCGCC
GGGGTGCTGA TCGTGCGCAC CGAAACCGAG CGCTGGGTGG TGCCGCCGGG TCACGCGGTC
TGGATGCCCG CGGGTCTGCT GCACCGTTTG TCCGCCGCCA GTCCCGTCGA ATTTCATTCG
CTCCATGTCG CGCCTGACGC CGCGCCGCTT GCGCCGCACA GCGGCGCCGT CGTGCCCGAC
CCGCTGGTGG GGGCGTTGCT GATCGCCGCG GCCGATCTGC CGCACGACCA ACCGTTCGAC
GAACCGGCCG CGCGTCTCGT GCAAGTGTTG CTGGACCGGC TGCCGGGTCT GCGCACCGTG
CCGCTAGGGT TGAACTGGCC GCGCGATCCA CGCGCCCAGC GGATCGCCGA CGCGCTGAGC
GCCAATCCGG CCGACGCTGC GGTACTCGAA GAGCTGGCCG CGGCGGCCGG CGTGACGGCC
CGAACGGCGG CGCGGCTGTT CGTCAAGGAA ACGGGGCAAA CCTTCGGGCA GTGGCGCCAG
CAACTTCGCC TGCTGGTCGC ATTGGAACAC CTCGGCGGCG GTGCGAGCGT CACGCAGGTG
GCGCTCGAAG TGGGCTACAG CGACGTGTCG TCGTTCATTG CGGTGTTCCG GGATGCGTTC
GGCGACACGC CCGCGCGTTA TTTCCGCTAA
|
|---|
| Protein sequence | METFDPDGVE QPVFVIREHH ETLDEPLGAY RRARLIHVSA GVLIVRTETE RWVVPPGHAV
WMPAGLLHRL SAASPVEFHS LHVAPDAAPL APHSGAVVPD PLVGALLIAA ADLPHDQPFD
EPAARLVQVL LDRLPGLRTV PLGLNWPRDP RAQRIADALS ANPADAAVLE ELAAAAGVTA
RTAARLFVKE TGQTFGQWRQ QLRLLVALEH LGGGASVTQV ALEVGYSDVS SFIAVFRDAF
GDTPARYFR
|
|---|
| |