| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5457 |
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| Symbol | |
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| ID | 6278215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1660597 |
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| End bp | 1662057 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616542 |
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| Product | peptidase M20 |
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| Protein accession | YP_001889185 |
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| Protein GI | 187920154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.448917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCCG ACGATACCCA GCAGGCTCAA CGCATCAACC CCGAGACGCT ACGCGAATTC
GTGGACCGCA AGTGGAACGA CGAGATCGTG CCCGCGTTGA CGGACTACAT CGCCGTGCCG
GCCAAGAGCC CGGCGTTCGA TCCCGAGTGG GTCAAGCACG GCTATCTGGA GCGCGTGATC
ACCGACGCGG CGCAATGGGC CGAACAGCAG CCGGTGCGCG GCCTGAAACT CGAAATCATT
CGTTTGCCGG GCCGTACGCC CGTGATCTTC TTCGAGTCGC CGGCGACGCG TTCGGGCAGC
GAGGAAACCA TCGTGCTGTA CGGGCACCTC GACAAGCAGC CTGAGTTCGA CGGCTGGCGC
AACGACCTCG GACCGTGGAC ACCGAAGCTC GAGAACGACA AGCTCTACGG CCGCGGCGGC
GCCGACGACG GTTATGCGAT CTACGCAAGC ATCACCGCGC TTGCCGCGCT GGACGCGCAA
GGTGTCGAGC GTCCGCGTTG CGTCGGTCTG ATCGAAACCT GCGAGGAGTC GGGCAGCTAC
GATCTGCTGC CTTATGTCGA TGCGCTGCGC GAGCGGCTCG GCAAGGTGGG TCTGGTGGTG
TGCCTGGATT CAGGCGCGGG CAACTACGAT CAGCTGTGGC TCACCACGTC GTTGCGCGGC
CTGGTCGCCG GCGATCTGGA AGTGCAGGTG CTCGACGAAG GCATTCACTC GGGCGGTTAT
GGCGGCATCG CGCCGTCGAG CTTCCGCATC ATGCGGCAAC TGTTCGACCG TCTTGAAGAT
TCCGCCAACG GCACGCTGCT GCCGAAGGGT TTCCATATCG ACATCCCCGC GGACCGTCTG
CGTGAGGCGG AAGCCACCGC CAGGATTCTC GGCGACGACG TCTGGAAGAA GCTGCCGTGG
GCGTGCGGCC AGGACGGCCG CCAGGTGCTG CCCACCACCA CCGATCCGAA GGAGGCCTTG
CTCAATTCGA CGTGGCGTCC GTCGCTCTCG GTGACCGGCG CGGCGGGCTT GCCCGCACTC
GCTGACGCCG GCAACGTGCT GCGTCCGCGC ACCGCGTTCA AGCTGTCGCT GCGTCTACCG
CCGATGATCG AAGCAGAGAA GGCCGTCGCG GAACTGAAGG CGCTGCTCGA AGTCGATCCG
CCGTACAACG CCAAGGTCAC CTTCAAGCCG GACGCGGGCG CGGCGAGCGG CTGGAGCGCG
CCCGATCTCG CCCCGTGGCT CGCCACCGCG CTCAACGACG CGTCGCGTCA GCACTACGGC
GCCGACGTCG CGTATATGGG GCAGGGCGGC ACCATCCCGC TGATGAACGT ATTGAAGGCA
GGCTTCCCGA AATCGCAGTT CATGGTGTGC GGCGTACTCG GACCGAAGTC GAATGCGCAC
GGGCCGAACG AGTTCCTGCA CGTGCCGTAC GGCAAGAAGC TCACGGCCGC GGTTGCCGAG
GTGATCGCCG CCGCGCCCTG A
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| Protein sequence | MISDDTQQAQ RINPETLREF VDRKWNDEIV PALTDYIAVP AKSPAFDPEW VKHGYLERVI
TDAAQWAEQQ PVRGLKLEII RLPGRTPVIF FESPATRSGS EETIVLYGHL DKQPEFDGWR
NDLGPWTPKL ENDKLYGRGG ADDGYAIYAS ITALAALDAQ GVERPRCVGL IETCEESGSY
DLLPYVDALR ERLGKVGLVV CLDSGAGNYD QLWLTTSLRG LVAGDLEVQV LDEGIHSGGY
GGIAPSSFRI MRQLFDRLED SANGTLLPKG FHIDIPADRL REAEATARIL GDDVWKKLPW
ACGQDGRQVL PTTTDPKEAL LNSTWRPSLS VTGAAGLPAL ADAGNVLRPR TAFKLSLRLP
PMIEAEKAVA ELKALLEVDP PYNAKVTFKP DAGAASGWSA PDLAPWLATA LNDASRQHYG
ADVAYMGQGG TIPLMNVLKA GFPKSQFMVC GVLGPKSNAH GPNEFLHVPY GKKLTAAVAE
VIAAAP
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