Gene Bphyt_5446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5446 
Symbol 
ID6278015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1645384 
End bp1645911 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID642616531 
ProductPRC-barrel domain protein 
Protein accessionYP_001889174 
Protein GI187920143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.956105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACC AGACACAAAC GCAAGCCGGC ATGCGACAGG ATCAAGGCGC CCGGATCGTC 
GGCAAAGGCA GCGCGACCGC GGAAGGCCCC GGCCCGGACG TGATGGCCGC CGCCACGCTC
GACGGCAACA AGGTGCTCAG CAGCGACGGC GAAGATATCG GCAAGATCAA GGACATCATG
CTCGATGTCG GCTCGGGCCG CGTTGCGTAT GCCGTGCTCT CGAGCGGCGG CTTTCTCGGC
ATCGGCGACA AGCTGCTCGC CATTCCATGG CACGCATTGA CGCTCGATAC CGGCCGCAAA
TGCTTCGTGT TGAACATGAC CGCGGAGCGC GTGAAGAACG CACCGGGCTT CGACAAAGAC
CATTGGCCGT CCATGGCGGA CCAGACTTGG GCCACGTCCG TGCACCAGTA CTACGGCAGC
GAACCCTATT GGGGCCGCGA CTCGACGGTG CGTCGCGACG ACTACGGCGT GGGCGACATT
CCGCCCGCGT CGTCGGACGC GCCGGAGGCT GGCGGCCTGA AGTTGTAA
 
Protein sequence
MVNQTQTQAG MRQDQGARIV GKGSATAEGP GPDVMAAATL DGNKVLSSDG EDIGKIKDIM 
LDVGSGRVAY AVLSSGGFLG IGDKLLAIPW HALTLDTGRK CFVLNMTAER VKNAPGFDKD
HWPSMADQTW ATSVHQYYGS EPYWGRDSTV RRDDYGVGDI PPASSDAPEA GGLKL