Gene Bphyt_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5436 
Symbol 
ID6277709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1638721 
End bp1639062 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID642616521 
Producttransport-associated 
Protein accessionYP_001889164 
Protein GI187920133 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.627744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA TCCAACTTCT GAAGACCGCA GGTAGCATCG CTTGTGTCGC TTTCGCACTG 
AACGCAACGA ACGCCATGGC GCAAAGCAGC GCTCCGTCGG CGGCGTCGGA AACCATCGGC
CAGCACGTCG ACGACGGCAC CATCACCACC AAGGCCAAGG CGGATTTGCT GGCCGCGAAG
AACGTCAAGT CGACGCATAT TCACGTGAAG ACCCGCAAGG GCGTGGTGTG GCTCACGGGC
ACGGTGCCTT CGGCCGACGA CAAGGCAGCA GCTGGCGAAG TCGTGGAAGC CGTGAAGGGC
GTGTCGAGCG TGAAGAACCA TCTGAAGATC GCGGCCGAAT AA
 
Protein sequence
MKTIQLLKTA GSIACVAFAL NATNAMAQSS APSAASETIG QHVDDGTITT KAKADLLAAK 
NVKSTHIHVK TRKGVVWLTG TVPSADDKAA AGEVVEAVKG VSSVKNHLKI AAE