| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5433 |
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| Symbol | |
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| ID | 6279885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1633451 |
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| End bp | 1635223 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616518 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001889161 |
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| Protein GI | 187920130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.735441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.336053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTTC GCTACACCTT CTGGTTGCGC CAATCACTGA TGGCAGGGTC CATGGCGACC
GCGCTGGTCG CGATGGCGCT CGTGCTCGTC ACGTTCAGCA CCATGTGCGC GGCGGCTGAA
CCGGACGATT CGCCGGAAGC CGCCGCGAGC GCCGATATAG AGGCATCGGC GCCGGACGCG
CCCCGCTTCG TGAGCGGCCA GCCCAATCAG CGCGCGGAGC CGAACGGCCA ACCGCTGCAG
GATTCGCATG CGGCCCCGAC ACGCGCGCCT CGGCAGCCAC GCGCAGTCGC GTCGGCGCAG
AACGAAGCGT CGGGCAGCAC GGCGCAGCGC AACGCGAAAG CGGAGCCGGC GGCGATTCCC
GTACCGCCGG AAACCGCGTC GGTCACGCAG CATTCCATCC GGCTCGATGG CCGCAAGATC
GACTACACGG CCACCGCGGG CAACCTGCTG TTGCGCGACA AGACAGGCCA GGCCAACGCG
AGCGTTTTTT ACGTGGCCTA CACCGTCCCG AGTAAAACTC CGCGGACGCG GCCGGTTACG
TTCCTGTTTA ACGGCGGCCC AGGCGCCGGC ACTGTCTTTC TGATGATCGG CTCATTCGGG
CCGAAGCGGG TGCGTACCGC GAGTCCCGAT ATCACGCCGC CCGCACCGTA TACGCTCGCC
GACAATCCCG ACAGCCTGCT CGATAGCACC GACCTCGTTT TTATCGACGC CGTCGGCGCG
GGCTTGTCGC GTGTCGTCGG TCATGGAACG GGCAAAGACT TTTGGGGCGT CGACAAGGAC
GTCGACGCGT TCTCGCAATT CATCGACCGC TATCTGACGG TGAACCAGCG CTGGAATTCG
CCGAAGTACC TGCTCGGCGA ATCGTATGGG ACCGCGCGCG CCGCGATGCT CGCGTATCAG
TTGGGGCAGA ACAATATCGC GCTCAACGGC GTGATCCTGA TGTCGTCGGT GCTCGATTCG
GCCGCGTTTT CGGCTGGCTC GGATTTCAAG AGCGAAAGCT ATCTGCCGAG CTTCGCGGCG
ATCGCCTGGT ATCACGACAA GATCGTGCCG AAGCCTGCCA GTCTGCCAGC CTTTCTCGAC
GAAGCGCGCG CGTTCGCACG CGGCCCGTAT GCGCAAGCCC TCGCGCAAGG CGACGCGCTG
CCCGAGGCCG AGCGCGACGT AATCGCCGCG CGCGTCGCGC AATTCACCGG CCTCGATGTC
GCCTATGTGA AGCGCAGCCG TTTGCGTCTT TATCCGTCGC GTTATCGGAG TGAATTGCTG
CGCGATCAGG CGCGTAGCGT TGGCCGCTAC GATGCGCGCT TTGAAGGCAT CGACTTCGAT
AGCGTCGCCG ATCGCCCCGA CTACGATGCA TCGGTGAGCA GCGTGTCGAG TGCATTCGGC
GCCGCGCTGC ATCAGCATTT CGCCGAGGAC CTGCACTTCA CGCCGGCCGA CCGCTACCGC
GTCTTTAACG ACGAAGCGTT GACGCAATGG GACTGGAAGC ATCGCGAATG GTGGGGCGAG
CGTTTGCCCG TACCTTATGC GGCGGGCGAT CTGGCTGAAG CGATGCGGCA GAATCCGCAA
TTGCGGGTGA TGTCGGTGAA CGGCTATTTC GATCTGGCCA CGCCGTTCTA CGCGACTGAA
TATGCGCTCG CGCACCTGGG TGTGGACGGG CCGCTGCGCG CCAACGTGCG CATCGCCTAC
TATCCGACCG GTCACATGAT CTATCTCGAC GACGCGGCCT TGCACACGCT CAGGCGCGAT
CTCGCGAGTT TCTATGCGGC GGGTGCGCGC TAG
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| Protein sequence | MGLRYTFWLR QSLMAGSMAT ALVAMALVLV TFSTMCAAAE PDDSPEAAAS ADIEASAPDA
PRFVSGQPNQ RAEPNGQPLQ DSHAAPTRAP RQPRAVASAQ NEASGSTAQR NAKAEPAAIP
VPPETASVTQ HSIRLDGRKI DYTATAGNLL LRDKTGQANA SVFYVAYTVP SKTPRTRPVT
FLFNGGPGAG TVFLMIGSFG PKRVRTASPD ITPPAPYTLA DNPDSLLDST DLVFIDAVGA
GLSRVVGHGT GKDFWGVDKD VDAFSQFIDR YLTVNQRWNS PKYLLGESYG TARAAMLAYQ
LGQNNIALNG VILMSSVLDS AAFSAGSDFK SESYLPSFAA IAWYHDKIVP KPASLPAFLD
EARAFARGPY AQALAQGDAL PEAERDVIAA RVAQFTGLDV AYVKRSRLRL YPSRYRSELL
RDQARSVGRY DARFEGIDFD SVADRPDYDA SVSSVSSAFG AALHQHFAED LHFTPADRYR
VFNDEALTQW DWKHREWWGE RLPVPYAAGD LAEAMRQNPQ LRVMSVNGYF DLATPFYATE
YALAHLGVDG PLRANVRIAY YPTGHMIYLD DAALHTLRRD LASFYAAGAR
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