| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5421 |
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| Symbol | |
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| ID | 6278570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1618665 |
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| End bp | 1620929 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616506 |
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| Product | DEAD_2 domain protein |
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| Protein accession | YP_001889149 |
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| Protein GI | 187920118 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACG TGGTCGCCGT GCGGGCGATG TGCGAGTTCA CCGCGAGGCG TGGCGATCTG
GATCTGCGCT TCACGCCCGC GCCGACCTCG CTCGAAGGCA TGGCGGGCCA CGTGACCGTG
GCCGGCCGGC GCGCGAGCGG CTACGAAACC GAGATCACGC TGACCGGCAC GCACCGCAAT
CTGACCGTGC GCGGGCGCGC CGACGGCTAC GATCCCGTCG CGAACCGCGT GGAAGAGGTC
AAGACGCATC GCGGCGATCT CGAACGCATG CCAGCCAATC ACCGCACGCT GCACTGGGCG
CAGGCGCTCG TCTACGGTCA TCTGCTGTGC CGGATGCGGG AGCTAACGGA GTTGACCGTA
GCGCTGGTGT ACTTCGATAT CGGCACGCAG AAAGAGGTAC TGCTGACGCA AACGCACACC
GCGCGCGAGC TGGAAATTTT CTTCGTCGGA CAATGCGAGT GCTTTCTCGA TTGGGCGGTG
CAGGAAGAAG CGCATCGGGC CGCGCGTAAC GCGGCGCTCG GCGCGCTGCA GTTTCCGCAC
GGGCAGTTTC GCAGTGGGCA GCGCGAGCTG GCGGTGTCGG TGTATCGCGC GGCGCGCGAC
GGCAAGCCTT TGATGGCGCA AGCGCCGACC GGCATCGGCA AGACGCTCGC GACGATTTTC
CCCTTGCTCA AGGCGTGCGC TGCGGACCAG ATCGAGCGGA TATTCTTTCT GACCGCCAAG
ACGCCGGGCC GCGCGCTGGC ATTGGACGCG ATCGAAACAC TCCATCAAGG CGCCACGCGT
CTGCCGTTGA GAACCCTTGA ACTGGTCGCG CGCGACAAAG CCTGCGAGCA TCCCGACAAA
GCCTGCAACG GCGAATCCTG TCCGCTCGCG CGCGGCTTCT ACGACCGGCT CGACGCGGCC
CGCGGCGCGG CGCTGGCCGG TCCGCGGCTC GACCGCGCGG CGGTGCGCGA AGCGGCGCTC
GCCAACGAGG TCTGTCCGTA CTATCTGGCG CAGGAACTGG CGCGCTGGGC CGACGTGGTG
GTCGGCGACT ACAACTACTA CTACGACAGC AGCGCAATGC TGTACGCGCT TACGCAGATC
AACCAGTGGC GCGTCGGCGT GCTGGTGGAC GAGGCGCACA ATCTGCTCGA CCGCGCGCGG
CGCATGTACA GCGCGTCGCT CGATCAGGCC ACGTTCCGGC TCGCGCGCAA GACGGCGCCG
GCCGCCTTGC GCAAGCCGCT GGAGCGGCTG CACCGCGAGT GGAACGCCGT CAAGCGCGCG
CAGACCGCGC CCTATCAGGT GTATGCCGAG GTCCCCGGCA AACTGCTCTC GGCCGCGCAG
AATCTGATCG GCGCCGTCAC CGATCAACTG GCGGAAGCAC CGCTTTCCAT CGACGAAGCG
TCGCTGCGTT TTTTCTTCGA CGCGATGCAT TTCGTCGCGC TGGCCGAGCA GTTCGGCGAG
CATTCAATCT TCGATATCAC GCTCGCCACA GACCGTTACG CGCCGCGCGA CAAAACGAAT
GCCACGCTGT GCGTGCGCAA CGTGATTCCC GCGCCGTTTC TCGCGCCTCG CTACGCGGCC
GCGCGCACCA CGGTGATGTT CTCCGGCACG CTCAACCCGC ATCATTTCTA TCGCGACACG
CTTGGCCTCC CAGAACAGAC CCAATGGCTC GACGTGGAAG GGCCTTTTCG CGCCGAGCAG
TTGCAGGTGC GCGTGGCCGG CAACGTATCG ACGCGTTGGC GCGACCGCGA GCGTTCCCTC
ATGCCGATCG TCGATCTGAT CGCGAAGCAA TACGCGGCGC AGCCGGGCAA CTATCTGGGC
TTTCTGAGCA GCTTCGAGTA TCTGCAGCGC GTGGTCGCGC TGATGCGCGA GCGGCATCCG
GATTTGCCGG TCTGGGCGCA GGAACCCGGC ATGGACGAAA CGGCGCGCGA CGCTTTTCTC
GCGCGTTTTC GCACCATGAG CCAGGGTGTG GGCTTCGCGG TGCTCGGCGG CGCATTTTCG
GAAGGCGTCG ATCTGGTCGG CCAGCAATTG ATCGGCGCGT TCATCGCCAC GCTCGGTCTG
CCGCAGATGA ACGAGATCAA CGAACAGATG CGTCGCACGA TGGAGACGAG GTTCGGCAAC
GGCTACGACT ACATGTATCT GTACCCAGGC TTGCAGAAAG TGGTGCAGGC GGCCGGACGC
GTGATTCGCA CGGAGCAGGA CCAGGGCGTG GTGCACCTGA TCGACGACCG CTATCGGCGG
CCGGAAGTGC GGCGCTTGCT GCCACGCTGG TGGGACGTGC AATAG
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| Protein sequence | MTYVVAVRAM CEFTARRGDL DLRFTPAPTS LEGMAGHVTV AGRRASGYET EITLTGTHRN
LTVRGRADGY DPVANRVEEV KTHRGDLERM PANHRTLHWA QALVYGHLLC RMRELTELTV
ALVYFDIGTQ KEVLLTQTHT ARELEIFFVG QCECFLDWAV QEEAHRAARN AALGALQFPH
GQFRSGQREL AVSVYRAARD GKPLMAQAPT GIGKTLATIF PLLKACAADQ IERIFFLTAK
TPGRALALDA IETLHQGATR LPLRTLELVA RDKACEHPDK ACNGESCPLA RGFYDRLDAA
RGAALAGPRL DRAAVREAAL ANEVCPYYLA QELARWADVV VGDYNYYYDS SAMLYALTQI
NQWRVGVLVD EAHNLLDRAR RMYSASLDQA TFRLARKTAP AALRKPLERL HREWNAVKRA
QTAPYQVYAE VPGKLLSAAQ NLIGAVTDQL AEAPLSIDEA SLRFFFDAMH FVALAEQFGE
HSIFDITLAT DRYAPRDKTN ATLCVRNVIP APFLAPRYAA ARTTVMFSGT LNPHHFYRDT
LGLPEQTQWL DVEGPFRAEQ LQVRVAGNVS TRWRDRERSL MPIVDLIAKQ YAAQPGNYLG
FLSSFEYLQR VVALMRERHP DLPVWAQEPG MDETARDAFL ARFRTMSQGV GFAVLGGAFS
EGVDLVGQQL IGAFIATLGL PQMNEINEQM RRTMETRFGN GYDYMYLYPG LQKVVQAAGR
VIRTEQDQGV VHLIDDRYRR PEVRRLLPRW WDVQ
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