| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5412 |
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| Symbol | |
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| ID | 6277454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1605251 |
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| End bp | 1606144 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616497 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001889140 |
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| Protein GI | 187920109 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.663662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAC AAAAAACCAT GCGGCAACTC GAACTCCGCC ACATCCACGC CTTCGTTTGC
GTTGCGAAAC AGCTTCATTT CTCGCGCGCC GCCGACGAAC TCGGGATTGC CGCGCCGTCG
CTGACCAAGC TGATCCAGGA GGCGGAACGG CTGCTCGGCG TGCGGCTGTT TCATCGCACC
AAGCGCTCGG TCGCGCTGAG CGCGGCGGGC AGCGCCTATC TCGCCGAGGC ACTGGTCGCG
CTCGATCACC TCGCGCGCGG CGAGGAGCGC GCGGTGCTGG CCGAGCGTGG CGAACTTGGA
CGCGTCGAAG TCGGGTATGT GGCGTCGGCG GCGTATGCGG GCGTATTGCA GCGCGACGTC
GGCGGATTTC GTGGCACGCA TCCGGGCGTC GATATCTCGA TCCGCGAGGT GCCGATGGAC
AACATTGCCG CGATGCTCCG CGACGGCCTG CTCGACGCCG CCTACGTGCG CCCGCCGATG
CTGCTCGCCG ACGGCATTCA GGCCACGACC GTGCATCGCG ACCAGTTCGT CCTAGCGCTG
CCGGCCGACT CCGCGCTGGC AGACTCGGCG AGCGTCAAAC CGGCGCAACT GCGCGACCAG
TGCTTCGTGC TGCCGGAGCA GGAAGCGGGC ACCTTCGAAG TCGCGCGCCG CGGACGCTTC
TCCGCACGCC TCGGACCGCG CCCCGGCACG CTCGCCTCGG TGCTCGCCTG CGTGTCGCTG
GGCGGCTACG TCGCCGTCGT GCCGCATACG CTCGCCGACT GCATCGCGTT GCCGGGTGTG
GTGTACCGCG ACATCGCCGG GCCATCCATC GCGTCGGAGA TCGCGATTGC CTTCCGCAAG
TACGAGCGGG CCCCGGCCGT CAAGGCGTTT CTCGACTTCG TGAGACGCAA ATGA
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| Protein sequence | MEIQKTMRQL ELRHIHAFVC VAKQLHFSRA ADELGIAAPS LTKLIQEAER LLGVRLFHRT
KRSVALSAAG SAYLAEALVA LDHLARGEER AVLAERGELG RVEVGYVASA AYAGVLQRDV
GGFRGTHPGV DISIREVPMD NIAAMLRDGL LDAAYVRPPM LLADGIQATT VHRDQFVLAL
PADSALADSA SVKPAQLRDQ CFVLPEQEAG TFEVARRGRF SARLGPRPGT LASVLACVSL
GGYVAVVPHT LADCIALPGV VYRDIAGPSI ASEIAIAFRK YERAPAVKAF LDFVRRK
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