| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5386 |
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| Symbol | |
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| ID | 6277669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1574684 |
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| End bp | 1575502 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616472 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001889115 |
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| Protein GI | 187920084 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.953712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0884729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCCT GGCGCATTTC TCCACCGCAT CGCAGCGAAC AGATCAGCAC TTCGCGCGCG
ACTGAACTCG TCATGTCGAT TTCGCATGCG GATGCCGACG CGCTCGCAGC CAGCATTCTA
AAAACTGTCG GCGATACGCT GCCGGTCTCG CAGTGCACCA TCTTTGCCTA CGAATTCGAC
GCGAGGCCGC GCACGGTTTC CGCCGCCGAT CATCGCGGCG GCCGCTTTCT GCGCGACGTC
GCCGATCGCT ACGCCACGCA CTTCTATGCG CTCGACGGCA ATCGCGCGAT CATCGGCCGG
CCGCACGACA AACCGGCGCG CGACGCGCTG GTGCTGCACC AGCAACAAAG CGAGGAGATA
GAAAACGAAG CCTATCGCGC GGCCTGTTAT GCGCAGCCGA ACGTGTCCGA CCGGCTATCG
CTGCTCGTGC AGCCCATGGA ATGCGTCTGG CTGTCGATCA ATCTGTATCG CGACCGTGCG
TATGGCGTGT TTCAGCCGGG CGAACTTGAA CGCATCGAAA GCCTCGCGCA CTTGTTCGCA
CACGCAGCGA AGGGCCATTA CGCGCTGAAT GGACAGCATC AGCAAGGTTC GGCCGCCGCG
ATGCTGGCGC GGGTCAGGCG TGCTTGCCCG GCACTCACGT CGCGCGAACT CGATGCGTTG
CGCGGCACGC TCGAAGGCGC CAGTGCCGCT GAAATCGCGG TGCAAATGGG GGTCAAGCCT
GCCAGTGTGA TTACCTATCA GAAGCGCGCA TACGCGCGGC TCGGGATTTC GAGCCAGAGG
CAGTTGTTTG CGTTGTGCAT GACGCCCGAA CTGGCTTGA
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| Protein sequence | MRSWRISPPH RSEQISTSRA TELVMSISHA DADALAASIL KTVGDTLPVS QCTIFAYEFD
ARPRTVSAAD HRGGRFLRDV ADRYATHFYA LDGNRAIIGR PHDKPARDAL VLHQQQSEEI
ENEAYRAACY AQPNVSDRLS LLVQPMECVW LSINLYRDRA YGVFQPGELE RIESLAHLFA
HAAKGHYALN GQHQQGSAAA MLARVRRACP ALTSRELDAL RGTLEGASAA EIAVQMGVKP
ASVITYQKRA YARLGISSQR QLFALCMTPE LA
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